Protein

MIA_03681_1

Length
432 amino acids

Browser: contig04:1874974-1876273-

Protein function

EGGNOG:0PN73SEN34tRNA-splicing endonuclease subunit sen-34
SGD closest match:S000000066SEN34tRNA-splicing endonuclease subunit SEN34
CGD closest match:CAL0000194258orf19.6879tRNA-splicing endonuclease subunit Sen34

Protein alignments

%idAln lengthE-value
A0A0J9X9E5_GEOCN45.789%1902.68e-46tRNA-splicing endonuclease subunit Sen34 OS=Geotrichum candidum GN=BN980_GECA06s00912g PE=3 SV=1
UniRef50_A0A0J9X9E545.789%1905.47e-43tRNA-splicing endonuclease subunit Sen34 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9E5_GEOCN
MCA_03692_145.000%2004.93e-46MCA_03692_1
A0A167FFD6_9ASCO48.889%1355.48e-35tRNA splicing endonuclease subunit SEN34 OS=Sugiyamaella lignohabitans GN=SEN34 PE=4 SV=1
A0A060SXM8_BLAAD50.806%1244.94e-35tRNA-splicing endonuclease subunit Sen34 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A05434g PE=3 SV=1
A0A1E3PI79_9ASCO42.029%1384.70e-25tRNA-intron endonuclease catalytic domain-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83191 PE=4 SV=1
A0A1E4TIE8_9ASCO47.778%908.01e-25tRNA-splicing endonuclease subunit Sen34 OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_55386 PE=3 SV=1
Q6C497_YARLI51.613%936.66e-24tRNA-splicing endonuclease subunit Sen34 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E28600g PE=3 SV=1
SEN34_YEAST48.936%943.10e-21tRNA-splicing endonuclease subunit SEN34 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEN34 PE=1 SV=1
Q59T38_CANAL44.554%1012.87e-18tRNA-splicing endonuclease subunit Sen34 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6879 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.3418

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 400 432

Detailed signature matches

  1. Domain IPR006677
    tRNA intron endonuclease, catalytic domain-like
    1. PF01974 (tRNA_int_endo)
    2. SSF53032 (tRNA-intr...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.40.13...
  3. mobidb-lite (disord...)

Protein sequence

>MIA_03681_1
MKREIQRKNKEKIPIAVVNGRGLVFDVRDVARLRAEYHMCGTLTGVLPQFPQQNVFMGLPLELMPEEIKYLVEEANAAYL
VDDGRAHDLALWTFDEEDARVLQEQENGIRQEQVWAHAVQSIKNRREAFRKRGVVQDAEESLMMYRDMALTAEEMKIVQK
MEAAGEAAGASGVQFHSIVTATNEQPEQLPAYEMYRAMYGTRARYDRARVVRQAARKAVKAAERESASIARDQDEESKSE
DETIVKEGSETAQKGLADDTGIKEGNKGDEDGDKEDNGEDDGDDDEEEEDETLEKDTVQASMDPPRVMEPDPAAYAIYKY
FQEQVPYGNEESSSGSDSSVGYFLSPGLRFGGQFVAYPGDPLRYHSHHIVTGVGYDERFKIMDIIGGGRLGTAVKKTWFV
GGLDDGSSGETAGQTRSPPAFHGFSVEWAAFG

GO term prediction

Biological Process

GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation

Molecular Function

GO:0000213 tRNA-intron endonuclease activity

Cellular Component

None predicted.