Protein
MCA_03692_1
Length
323 amino acids
Gene name: SEN34
Description: tRNA-splicing endonuclease subunit SEN34
Browser: contigC:783317-784289+
RNA-seq: read pairs 339, FPKM 12.9, percentile rank 30.8% (100% = highest expression)
Protein function
| Annotation: | SEN34 | tRNA-splicing endonuclease subunit SEN34 | |
|---|---|---|---|
| KEGG: | K15323 | TSEN34 | tRNA-splicing endonuclease subunit Sen34 [EC:3.1.27.9] |
| EGGNOG: | 0PN73 | SEN34 | tRNA-splicing endonuclease subunit sen-34 |
| SGD closest match: | S000000066 | SEN34 | tRNA-splicing endonuclease subunit SEN34 |
| CGD closest match: | CAL0000194258 | orf19.6879 | tRNA-splicing endonuclease subunit Sen34 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X9E5_GEOCN | 45.25% | 316 | 8e-83 | tRNA-splicing endonuclease subunit Sen34 OS=Geotrichum candidum GN=BN980_GECA06s00912g PE=3 SV=1 |
| UniRef50_A0A0J9X9E5 | 45.25% | 316 | 2e-79 | tRNA-splicing endonuclease subunit Sen34 n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9E5_GEOCN |
| A0A060SXM8_BLAAD | 43.16% | 329 | 9e-71 | tRNA-splicing endonuclease subunit Sen34 OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A05434g PE=3 SV=1 |
| Q6C497_YARLI | 37.58% | 314 | 7e-51 | tRNA-splicing endonuclease subunit Sen34 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E28600g PE=3 SV=1 |
| A0A1E4TIE8_9ASCO | 33.85% | 322 | 3e-42 | tRNA-splicing endonuclease subunit Sen34 OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_55386 PE=3 SV=1 |
| A0A167FFD6_9ASCO | 59.62% | 104 | 8e-40 | tRNA splicing endonuclease subunit SEN34 OS=Sugiyamaella lignohabitans GN=SEN34 PE=4 SV=1 |
| A0A1E3PI79_9ASCO | 31.71% | 350 | 6e-40 | tRNA-intron endonuclease catalytic domain-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83191 PE=4 SV=1 |
| MIA_03681_1 | 44.83% | 203 | 1e-38 | MIA_03681_1 |
| SEN34_YEAST | 45.71% | 105 | 3e-24 | tRNA-splicing endonuclease subunit SEN34 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEN34 PE=1 SV=1 |
| Q59T38_CANAL | 39.45% | 109 | 9e-20 | tRNA-splicing endonuclease subunit Sen34 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6879 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.4269
Protein family membership
- tRNA-splicing endonuclease (IPR006676)
- tRNA-splicing endonuclease, SEN34 subunit (IPR016690)
Domains and repeats
-
Domain
1
50
100
150
200
250
323
Detailed signature matches
-
-
PIRSF017250 (tRNA_e...)
-
no IPR
Unintegrated signatures
Protein sequence
>MCA_03692_1 MSQQSSSKNQLIPIHVVNRKGFIYSVESMKRLREEYNISGTLVGVLPQFPQQNVFHGMPLQLMPEEVKYLVEELKVAYLV DDSRAHDLALWAFDPETDGINVEKYRSEIQRTQADAHKQMALMKRRKALKLDPNAPLSPEEIKILEKMDGSSAVFYEIPT STLEVKEYLPAYSLYEQTFKDRQLNNSKNNTNTNMRQDDMNIINDGDNYETASTNSLVKVETPKDASYEIYKHLQQKGYF LSPGLRFGGQFLAYPGDSLRYHSHFTVTGYDFNEKFKIHDLVGGGRLGTTVKKSWFVGAKSNTNNKKEEDQYYGFSVEWS RFG
GO term prediction
Biological Process
GO:0000379 tRNA-type intron splice site recognition and cleavage
GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation
Molecular Function
GO:0000213 tRNA-intron endonuclease activity
Cellular Component
GO:0000214 tRNA-intron endonuclease complex