Protein

MIA_03652_1

Length
1,211 amino acids

Browser: contig04:1807902-1811681-

Protein function

EGGNOG:0PHGYSMC3Chromosome segregation protein
SGD closest match:S000003610SMC3Structural maintenance of chromosomes protein 3
CGD closest match:CAL0000193720SMC3Structural maintenance of chromosomes protein

Protein alignments

%idAln lengthE-value
A0A0J9XBR7_GEOCN55.041%12100.0Structural maintenance of chromosomes protein OS=Geotrichum candidum GN=BN980_GECA07s02122g PE=3 SV=1
MCA_04435_151.828%12310.0MCA_04435_1
UniRef50_A0A1E3Q5T148.321%12210.0Structural maintenance of chromosomes protein n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A1E3Q5T1_LIPST
A0A1E3PLP0_9ASCO45.190%12370.0Structural maintenance of chromosomes protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50270 PE=3 SV=1
Q6CI88_YARLI41.275%12550.0Structural maintenance of chromosomes protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A00616g PE=3 SV=1
A0A1D8PJK7_CANAL40.337%12470.0Structural maintenance of chromosomes protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SMC3 PE=3 SV=1
A0A060TGN9_BLAAD42.857%11550.0ARAD1D32186p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D32186g PE=4 SV=1
A0A167DW74_9ASCO40.825%11390.0Cohesin subunit SMC3 OS=Sugiyamaella lignohabitans GN=SMC3 PE=4 SV=1
SMC3_YEAST35.914%12530.0Structural maintenance of chromosomes protein 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMC3 PE=1 SV=1
A0A1E4TK84_9ASCO33.279%12290.0Structural maintenance of chromosomes protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_42779 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0613

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
1 200 400 600 800 1000 1211

Detailed signature matches

  1. Family IPR024704
    Structural maintenance of chromosomes protein
    1. PIRSF005719 (SMC)
  2. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  3. Domain IPR003395
    RecF/RecN/SMC, N-terminal
    1. PF02463 (SMC_N)
  4. Domain IPR010935
    SMCs flexible hinge
    1. PF06470 (SMC_hinge)
    2. SM00968 (SMC_hinge_2)
    3. SSF75553 (Smc hinge...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:1.10.28...
  3. G3DSA:1.20.5.170
  4. G3DSA:1.20.5.50
  5. G3DSA:3.40.50...
  6. cd03272 (ABC_SMC3_euk)
  7. mobidb-lite (disord...)

Residue annotation

  1. Walker A/P-loop cd...
  2. ATP binding site c...
  3. Q-loop/lid cd03272

Protein sequence

>MIA_03652_1
MHIKTITIQGFKSYKNHTVTDEFSPHHNVVVGRNGSGKSNFFAAIRFVLSDAYTKLSREERQSLLHEGSGTAVMSAFVEI
CFDNSDKRLPINSDQVVIRRTIGLKKDEYSIDHKSATKNEVMDLLESGGFSRANPYYIVPQGRITSLTNAKDLQRLNLLK
EVAGTQVYDQKRQESLKVLEETEGQRKRIADSLALIRDRLAELDTEKQELREYHQKDREKRSLEYIILDRELKDISASID
RLEDARFKSNDQNVQSLEQFAAYDDRIAALEQLIFNLINKNNLLQTESAQLAADLSDKLKTKAQRELEYSQISESSQNAK
SQTSSLQSQIKALRKTISEKSARLNTIAPRLETLLLQESQLKQAVQRLESDQSFLYSKQGRNSRFVSQQERDAWLNKEIA
AISQSIETSSQTHASLQADLDQLQTSLSSTSSLIQETRSTLMHSTERTRQSLKLINDAVALGDKLKDERKLLWRTIRSNE
ADLEKLQKACNSAQANAFTTLSHAQKEGLNAVNRIVKKLNLSGVYGPLAELISVTPQFEVAVEVTAGNSLFHIVVDNEET
ATTIMQELYRENSGRATFMPLNRLHPRHLSYPDHEHVLPLINNITYPPEIDAAVRQVFGKTVVTMNLDLGLQISQGNDLN
AITMSGDRVSNKGTITGGFYDSRKSRLAAFIEYQRTREDLEAQTQALASLKDQTETKNQEINKINNEINSYRASHEKLIA
SLAPLDSLLHTKVVEEGQIKDLIAEKKKTLQSAESSIQALTDNKDALTAELNSPFTQALSPEEIQTLKSLGAALPQKQKQ
LQELSLERTQVEQSKTELEIDISQNLQSQLDRLVSKLSSYLNKDDSTAPETKRLVESIDREIEATQADLASLEQKSDETT
KLIAANQAELQQLKDARIKLARTIENLNKQAEKHISKRSVLIQRRDEVVAKIRELGVLPPDAFTRYESVDADTLLKKFHA
VSNDLKRYGHVNKKAVEQYNEFTKNEEGLEARKAELEQSRKSIEKLIKTLDMRKDEAIDRTFRQVSKCFSEIFEKLVPAG
KGELVMHRKRDAPQGRRRHPHQDDELDEEEEEPMDQTNGSRIFSIESYVGIGISVSFNSKENDQQRIEQLSGGQKSLCAL
TLIFAIQLSDPAPFYLFDEIDANLDTQYRTAVAAMIREQARSAQFICTTFRTEMIHVADQFYGVSFQNKMSSIASISQED
ALTFVEGQQRP

GO term prediction

Biological Process

GO:0051276 chromosome organization

Molecular Function

GO:0005515 protein binding
GO:0005524 ATP binding

Cellular Component

GO:0005694 chromosome