Protein
MIA_03486_1
Length
1,511 amino acids
Browser: contig04:1320661-1325252-
Protein function
| EGGNOG: | 0PJAJ | RPO41 | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) |
|---|---|---|---|
| SGD closest match: | S000001858 | RPO41 | DNA-directed RNA polymerase, mitochondrial |
| CGD closest match: | CAL0000185076 | RPO41 | DNA-directed RNA polymerase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X6S8_GEOCN | 42.087% | 1169 | 0.0 | DNA-directed RNA polymerase OS=Geotrichum candidum GN=BN980_GECA04s04498g PE=3 SV=1 |
| UniRef50_A0A0J9X6S8 | 42.087% | 1169 | 0.0 | DNA-directed RNA polymerase n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X6S8_GEOCN |
| MCA_02709_1 | 33.533% | 1500 | 0.0 | MCA_02709_1 |
| A0A161HJK4_9ASCO | 37.513% | 989 | 0.0 | Rpo41p OS=Sugiyamaella lignohabitans GN=RPO41 PE=4 SV=1 |
| A0A060T809_BLAAD | 31.302% | 1083 | 6.16e-155 | DNA-directed RNA polymerase OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D03432g PE=3 SV=1 |
| RPOM_YEAST | 36.561% | 785 | 2.93e-138 | DNA-directed RNA polymerase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPO41 PE=3 SV=2 |
| A0A1E3PUP0_9ASCO | 31.784% | 1076 | 7.00e-136 | DNA-directed RNA polymerase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_30998 PE=3 SV=1 |
| Q6CH64_YARLI | 35.754% | 716 | 1.07e-128 | DNA-directed RNA polymerase OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A12001g PE=3 SV=1 |
| A0A1D8PCA4_CANAL | 34.406% | 808 | 2.43e-127 | DNA-directed RNA polymerase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPO41 PE=3 SV=1 |
| A0A1E4TGB0_9ASCO | 38.384% | 693 | 4.41e-125 | DNA-directed RNA polymerase OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_31657 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.7338
Protein family membership
- DNA-directed RNA polymerase, phage-type (IPR002092)
Domains and repeats
-
Domain
1
200
400
600
800
1000
1200
1400
1511
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
-
SSF56672 (DNA/RNA p...)
-
mobidb-lite (disord...)
Protein sequence
>MIA_03486_1 MPWCQRTLKPIEQGSFRRTCLAPFKSSPRSTLFSAHISQHALHTLRHSLDDRNLLNLSWDRSKEQYVLSDNKESPSHKHT STTNAQNENVAISKERKRSLKYTNRFARILNNELISPNYNDSFSLFFSSLEIGDIPRATLLFKEMIEGDLWLNDPKVPED CLLLLVFSHLKSTPEMANFQEIILDKIPYLLSLYIQSMENNSNAHPPYRTMAYICHYICLINDTQEKTNYITRLKYLWTH TFKLPMSPLLEHHDILSESDLQFLNFEPEIHETHTESKLHDSPEQELFSWNTHVSSSLDQVLKTDSFDVKSIFGKEIYEK SLKDGNQNYLMLYDNLCQKLIASGLDPLSIHTDPLLLKFERSFDAFNRKRQYQMETLLQNFVTQRKLNSDETKGKMKNGE LNEITKFAFSHGKSNPFAQQLFIDWVFSLENALTSILNHKDIKGPSSSDTNDLQSDLELPEYSSSSLKKELSRFAHVFAV LDPKDLASVLALEMTNFALKFILVSSDDETSFFTCNSLTSIAKSIGESIERAFTQKQIQKFSNKLKDDSHDPVNSQISEI FCRYSSFSPQSKQTAFRKSLIMSPTDRISLGVTFLTIALKICDFPLKHPSSGEIVRKSAFWHSYVLHKAKKIGVIKINEF LILELSKTSATQSSKLFSTSILSKTPPMLVKPRPWTAGLFGGYWFSQVPYLSVGSGDAPEQHAYINMAMKNNYMNKYLSA FNVLGECAWAINPQMLDVISQIWKLGIPFLDIPQRLDFKENEHIDMKKLSKDDFNILCTRVSLEYIINTAELFSKNGDRF YFSYKIDFRGRVYPQTNVSFWHMGPDHVRSLFMFWYGKPLGEKGLYWLKIHVATLFGLTKLRHVDRIKFVEENWDNIVQS VESPLDPKKLKANDLWWTKADKPFQMLAACFDLVSAVNSGNPESYISRICVAQDGTCNGLQHYAALGRDIQGAMEVNVIP QHKIDPTVTPETTYPRDIYGKVKQIVDDLIEKDTKLTGKDSATQETKALANEISAHVTRKIVKRPVMTSVYGVTKYGIVQ QVLEELKKNPVLDKSNLNKYSRYIGDKITEAYSQLFFNAQKLQSWLEECADRICESVRWDNYETGDSYKNDALSPSSDPK KDFLKKFLTSVIWTTPLGLPVVQPYRQHSFLYVRTGIQTVTIVNPFEVSPVKKMKQINGIAPNFIHSLDSTHMLMTAQAM ADARDKRQNQIKSFAAVHDSFWTHAADVEEMNNIIREKFVELHSEDLIQNLYNEFCVRYGGYLQLCYVLADSKAGKEITK LRLHDNTEDRPDCSVSDEQLSKLESEINCAKTKLLNLKEKETNLKNLVKLEEDLEVQKQLKCTLKEDRKAIKSIQLQIKD LKCLLKSQKNILSQTNIRIPKGKQEDSFLYNEMNQEYLLWKNRQTNQSEFNHKTDENMATPWTIIQKYNEPVYRYPDMKL PYGDKYLREKNISNNDQKTDEDESNESLNPQTPEYDTKKWIRVLVPLHIPKIPARGNFDINDVKYSEYFFN
GO term prediction
Biological Process
GO:0006351 transcription, DNA-templated
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
Cellular Component
None predicted.