Protein

MIA_03474_1

Length
932 amino acids


Browser: contig04:1295210-1298120-

Protein function

EGGNOG:0PGWJFG07379.1Periodic tryptophan protein 2
SGD closest match:S000000653PWP2Periodic tryptophan protein 2
CGD closest match:CAL0000174443PWP2SnoRNA-binding rRNA-processing protein

Protein alignments

%idAln lengthE-value
MCA_04077_177.056%9240.0MCA_04077_1
A0A0J9XB27_GEOCN72.101%9140.0Similar to Saccharomyces cerevisiae YCR057C PWP2 Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA OS=Geotrichum candidum GN=BN980_GECA07s03827g PE=4 SV=1
A0A167E655_9ASCO66.091%9260.0Pwp2p OS=Sugiyamaella lignohabitans GN=PWP2 PE=4 SV=1
A0A1E3PH56_9ASCO64.989%9140.0WD40 repeat-like protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13006 PE=4 SV=1
A0A060TB16_BLAAD65.647%8500.0ARAD1D31042p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D31042g PE=4 SV=1
Q6CG40_YARLI60.349%9180.0YALI0B01078p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B01078g PE=4 SV=1
PWP2_YEAST60.752%8510.0Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PWP2 PE=1 SV=2
UniRef50_P2563560.752%8510.0Periodic tryptophan protein 2 n=242 Tax=Fungi TaxID=4751 RepID=PWP2_YEAST
A0A1E4T9M4_9ASCO58.373%8480.0Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_146499 PE=4 SV=1
Q5A852_CANAL57.042%8520.0SnoRNA-binding rRNA-processing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PWP2 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0347

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Repeat
  4. Repeat
1 100 200 300 400 500 600 700 800 932

Detailed signature matches

    1. SSF50978 (WD40 repe...)
    2. PS50294 (WD_REPEATS...)
    1. SSF50969 (YVTN repe...)
    1. PF04003 (Utp12)
    1. PF00400 (WD40)
    2. PS50082 (WD_REPEATS_2)
    3. SM00320 (WD40_4)
    1. PR00320 (GPROTEINBRPT)
    1. PS00678 (WD_REPEATS_1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. cd00200 (WD40)
  2. mobidb-lite (disord...)

Residue annotation

  1. structural tetrad ...

Protein sequence

>MIA_03474_1
MKLDYKLSNIFGTVYRQGNIFFTPDGTALLSPVGNRVSYFDLANNKSFTFPYEHRKNIQRVALNPQATLLLSVDVDGRAI
LVNFVRRTVIHHFNFKEDVNDLKFSPDGKYFAVAAGREVQVWKTPDQTEERQFAPFVRHRIYTGHYAEVTTVTWSDDSRF
FLAGSKDLTTRIYSLNSEDSSAAGVLAGHKDSVIASFFSEDQETIFTVSKDGAVFEWKYLGESDFEDGEKEEEENSDEEE
EEDPTRRWRIINKNFFNQNNTHVTTCDFHPASNLLVVGFSSGLFALYELPDFTMIQTLSISQNAIDYVTINKSGEWLAFG
SSKLGQLLVWEWQSESYVIKQQGHFDSLNSIVYSPDGSKIVTASDDGKIKVWDAYSGFSIVTFTEHTSGITALEFSKRGN
VLFSASLDGSIRAWDLIRYRNFRTFTAPTRIQFSSLAVDPSGDVVCAGSLDDFDIHLWSVQTGQLLDRLQGHEGPVSALS
FGNEGGLLASTSWDKSVRIWSIFGRHTHVEPWTMTSDVLSVAMRPDSKQVAVSTLDGNLSFWDIEQGKQVGEVDGKFDIS
GGRYTTDKFTSEHSKRSKYFTTLCYSSDGTTILAGGNSKHICLYDVSNEVLLRKYVVSKNMALEGTLDMLNSKNMTEAGP
LDLIDTTGEASDLEDRLDISLPGASRGDLSARKMRPEIRVASIRFSPTGQSFGAASTEGLLLYSQDDSLLFDPLDLDIDV
TVKTTISILEEKKYLTALIMSFRLNERAVIQRVYEHIPIGEIGLIANEFPRVYLERFFKFLAGIIEDSPHVEYHLMWIRA
LINAHGSFMMTKKHVFASVVRSISKYVRRINKDINKLSSENIYTVQFLMGKNRRYVDNLPQQSSFELSKTNEKDDSDAEM
KDADSEDENKSDDENENNNSDDEEGWFGPESKNDIDFSSFPDEDDEDEDDEE

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005515 protein binding

Cellular Component

None predicted.