Protein
MCA_04077_1
Length
931 amino acids
Gene name: PWP2
Description: Periodic tryptophan protein 2
Browser: contigC:1958579-1961497-
RNA-seq: read pairs 1849, FPKM 24.5, percentile rank 47.2% (100% = highest expression)
Protein function
| Annotation: | PWP2 | Periodic tryptophan protein 2 | |
|---|---|---|---|
| KEGG: | K14558 | PWP2 | periodic tryptophan protein 2 |
| EGGNOG: | 0PGWJ | FG07379.1 | Periodic tryptophan protein 2 |
| SGD closest match: | S000000653 | PWP2 | Periodic tryptophan protein 2 |
| CGD closest match: | CAL0000174443 | PWP2 | SnoRNA-binding rRNA-processing protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03474_1 | 76.71% | 923 | 0.0 | MIA_03474_1 |
| A0A0J9XB27_GEOCN | 73.25% | 856 | 0.0 | Similar to Saccharomyces cerevisiae YCR057C PWP2 Conserved 90S pre-ribosomal component essential for proper endonucleolytic cleavage of the 35 S rRNA OS=Geotrichum candidum GN=BN980_GECA07s03827g PE=4 SV=1 |
| A0A167E655_9ASCO | 68.60% | 863 | 0.0 | Pwp2p OS=Sugiyamaella lignohabitans GN=PWP2 PE=4 SV=1 |
| A0A1E3PH56_9ASCO | 66.55% | 858 | 0.0 | WD40 repeat-like protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13006 PE=4 SV=1 |
| A0A060TB16_BLAAD | 65.14% | 852 | 0.0 | ARAD1D31042p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D31042g PE=4 SV=1 |
| Q6CG40_YARLI | 61.14% | 857 | 0.0 | YALI0B01078p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B01078g PE=4 SV=1 |
| PWP2_YEAST | 59.44% | 853 | 0.0 | Periodic tryptophan protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PWP2 PE=1 SV=2 |
| UniRef50_P25635 | 59.44% | 853 | 0.0 | Periodic tryptophan protein 2 n=242 Tax=Fungi TaxID=4751 RepID=PWP2_YEAST |
| A0A1E4T9M4_9ASCO | 57.65% | 850 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_146499 PE=4 SV=1 |
| Q5A852_CANAL | 57.61% | 854 | 0.0 | SnoRNA-binding rRNA-processing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=PWP2 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1352
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Repeat
-
Repeat
1
100
200
300
400
500
600
700
800
931
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
cd00200 (WD40)
-
mobidb-lite (disord...)
Residue annotation
-
structural tetrad ...
Protein sequence
>MCA_04077_1 MKLDYRLSNIFGTVYRQGNIQFTPDGKSLLSPVGNRVSCFDLANNKSFTFAYEHRKNVQCVALNAQATLMLSVDVDGRAI LVNFIKRNVIHHFNFKNPVHDLKFSPDGHYFAVAAGPHIQVWRTPQNTGDKQFAPFVRHRVYTGHYSEVTSIEWSDDSRF FLAGSKDLTTRIYSLHSEDSSAAGVLGGHKDSIISAFFSQDQETIYSISKDGALFEWKYLSERDFVKEGEETKESEDDSD NEVEDSSLRWRIVSKNFFNQNNAHVSTCAFHPSSNLLVVGFTTGIFTLYELPEFNMIQTLSISQNAIDNVTINKTGEWLA FGSSKLGQLLVWEWQSESYILKQQGHFDSLNSVVYSPDGSKIVTASDDGKIKVWDAYSGFSIVTFTEHTSGVTALEFSKK GNVLFSASLDGSVRAWDLVRYRNFRTFTAPNRVQFSCLAVDPSGEIICAGSLDDFDIHLWSVQNGQLLERLQGHEGPVSG LSFGVEGGLLASTSWDKTVRIWSIFGRSTQVEPWQLQSDVLAVAMRPDSKEVAVATLDGMITFWDVDLGKQVGEVDGKFD ISGGRFTTDKFTSEHSKRSKYFTTLCYSADGTTVLAAGNSKHICLYDVRNEVLLKKFVVSKNMALEGTLDMLNSKNMTES GPLDLIDTTGEASDLEDRLDTTLPGASRGDLSARKLRPEIRVADIKFSPTGISFSAASTEGLLVYSQDDTLLFDPLDLDI DVTVKTTIDTLKEEKYLTALIMAFRLNERFLVQRVYESIPVSQIPIIAADFPPVYLDRFFKFLASNIEESPHVEFQLIWI KNLISVHGRLIMDSRHKFASMIRSLGKYTRRINSDINKLSEVNVYTVQYLLGARRRDVPQSITISSTKTTKKADVSMKEV EDADSDKESSDNDDEFKSDDEEGWFGPESKAEMKFTDFPSNDEEMSSDNDE
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.