Protein
MIA_03372_1
Length
123 amino acids
Browser: contig04:1028459-1028945-
Protein function
EGGNOG: | 0PNWW | RPA12 | DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (By similarity) |
---|---|---|---|
SGD closest match: | S000003824 | RPA12 | DNA-directed RNA polymerase I subunit RPA12 |
CGD closest match: | CAL0000195650 | RPA12 | DNA-directed RNA polymerase subunit |
Protein alignments
%id | Aln length | E-value | ||
---|---|---|---|---|
MCA_01653_1 | 76.423% | 123 | 5.11e-70 | MCA_01653_1 |
A0A1E3PFU3_9ASCO | 72.358% | 123 | 3.73e-64 | DNA-directed RNA polymerase subunit OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_83810 PE=3 SV=1 |
A0A0J9XFC5_GEOCN | 70.161% | 124 | 4.10e-62 | DNA-directed RNA polymerase subunit OS=Geotrichum candidum GN=BN980_GECA13s02694g PE=3 SV=1 |
A0A060T5E3_BLAAD | 70.161% | 124 | 9.95e-62 | DNA-directed RNA polymerase subunit OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C11484g PE=3 SV=1 |
A0A1D8PHV8_CANAL | 69.106% | 123 | 3.99e-60 | DNA-directed RNA polymerase subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPA12 PE=3 SV=1 |
RPA12_YEAST | 67.200% | 125 | 4.41e-59 | DNA-directed RNA polymerase I subunit RPA12 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPA12 PE=1 SV=1 |
UniRef50_P32529 | 67.200% | 125 | 1.05e-55 | DNA-directed RNA polymerase I subunit RPA12 n=57 Tax=saccharomyceta TaxID=716545 RepID=RPA12_YEAST |
Q6CHJ6_YARLI | 66.935% | 124 | 1.57e-58 | DNA-directed RNA polymerase subunit OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A08151g PE=3 SV=1 |
A0A1E4THJ8_9ASCO | 54.762% | 126 | 1.55e-44 | DNA-directed RNA polymerase subunit OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_121657 PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0445
Protein family membership
Domains and repeats
-
Domain
1
20
40
60
80
100
123
Detailed signature matches
-
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PIRSF005586 (RNApol...)
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-
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cd10507 (Zn-ribbon_...)
-
-
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PS01030 (RNA_POL_M_...)
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no IPR
Unintegrated signatures
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NON_CYTOPLASM... (N...)
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SIGNAL_PEPTIDE (Sig...)
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SIGNAL_PEPTID... (S...)
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SIGNAL_PEPTID... (S...)
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SIGNAL_PEPTID... (S...)
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SSF57783 (Zinc beta...)
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Residue annotation
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Zn binding site cd...
Protein sequence
>MIA_03372_1 MAAVGSLIFCVTCGNLLDSAVGKTALDCNQCHASYDAKPFVNLSVVTTSAEDAFPSTLKLQRSVVKTHLSKEHLEDGAII KEKCPQCGNEEMQYHTLQLRSADEGATVFYTCTKCKYRFRTNN
GO term prediction
Biological Process
GO:0006351 transcription, DNA-templated
GO:0006379 mRNA cleavage
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Cellular Component
None predicted.