Protein
MIA_03143_1
Length
517 amino acids
Browser: contig04:330072-331626+
Protein function
| EGGNOG: | 0PGEI | FG05698.1 | WD repeat protein |
|---|---|---|---|
| SGD closest match: | S000000668 | RSA4 | Ribosome assembly protein 4 |
| CGD closest match: | CAL0000180486 | orf19.3778 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XFM1_GEOCN | 80.271% | 517 | 0.0 | Similar to Saccharomyces cerevisiae YCR072C RSA4 WD-repeat protein involved in ribosome biogenesis OS=Geotrichum candidum GN=BN980_GECA12s01143g PE=4 SV=1 |
| MCA_01057_1 | 76.306% | 536 | 0.0 | MCA_01057_1 |
| A0A167EQF7_9ASCO | 76.413% | 513 | 0.0 | Rsa4p OS=Sugiyamaella lignohabitans GN=RSA4 PE=4 SV=1 |
| A0A060T0V9_BLAAD | 70.588% | 527 | 0.0 | ARAD1C11550p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C11550g PE=4 SV=1 |
| Q6CHQ3_YARLI | 69.557% | 519 | 0.0 | YALI0A06479p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A06479g PE=4 SV=1 |
| A0A1E3PFU6_9ASCO | 72.115% | 520 | 0.0 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52613 PE=4 SV=1 |
| NLE1_YEAST | 67.761% | 518 | 0.0 | Ribosome assembly protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSA4 PE=1 SV=3 |
| UniRef50_P25382 | 67.761% | 518 | 0.0 | Ribosome assembly protein 4 n=170 Tax=saccharomyceta TaxID=716545 RepID=NLE1_YEAST |
| A0A1D8PM77_CANAL | 65.703% | 519 | 0.0 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.3778 PE=4 SV=1 |
| A0A1E4TD53_9ASCO | 52.987% | 519 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_142059 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2234
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
-
Repeat
1
50
100
150
200
250
300
350
400
450
517
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
structural tetrad ...
Protein sequence
>MIA_03143_1 MATLVPPPSKRQRRELQAPKIIDEIPDDLPHVIIKFQASDTGDVIGGNIRVPGNATEKQLETLLNKLLETDDEPSPYTFS LLKSEAAPGSNEAPTLVDITDNIYSSVLKPGHKTTEDHLTLVYTPRAVFKVKPITRSSSAISGHGSTILAVAFAPHTSGR MVTGAGDHTARIWDCDTQTPLKTLSGHSDWVLAVAWSPDGRLIATGSMDNTVRVWDPKTGKQIGAPYIGHSKWITSLAWE PLHLVKPGDTPRLASSSKDGTIRVWDVGRHVPLFSMTGHRATVSHVKWGGLGDIYSTSHDKSVRIWSGKDGRLVQNLQAH AHWVNHIALSTDYVLRTGPFDYKGKKGDVSDEDLVKLAKERFEKQASVGGSISERVVTASDDFTIYLWEPAKSNKPIFRM TGHQKPVNHVAFSPDGRYIASCSFDNSIKLWDGRDGKFIATFRGHVGAVYQCAWSSDCRLLVSCSKDTTLKVWDVRTKKL MSDLPGHQDEVYAVDWSVDGRRVASGGKDKQVRLWTH
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.