Protein
MCA_01057_1
Length
534 amino acids
Gene name: RSA4
Description: Ribosome assembly protein 4
Browser: contigA:3367885-3369490+
RNA-seq: read pairs 867, FPKM 20.0, percentile rank 41.4% (100% = highest expression)
Protein function
| Annotation: | RSA4 | Ribosome assembly protein 4 | |
|---|---|---|---|
| KEGG: | K14855 | RSA4 | ribosome assembly protein 4 |
| EGGNOG: | 0PGEI | FG05698.1 | WD repeat protein |
| SGD closest match: | S000000668 | RSA4 | Ribosome assembly protein 4 |
| CGD closest match: | CAL0000180486 | orf19.3778 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_03143_1 | 76.31% | 536 | 0.0 | MIA_03143_1 |
| A0A0J9XFM1_GEOCN | 71.35% | 534 | 0.0 | Similar to Saccharomyces cerevisiae YCR072C RSA4 WD-repeat protein involved in ribosome biogenesis OS=Geotrichum candidum GN=BN980_GECA12s01143g PE=4 SV=1 |
| A0A167EQF7_9ASCO | 67.17% | 533 | 0.0 | Rsa4p OS=Sugiyamaella lignohabitans GN=RSA4 PE=4 SV=1 |
| Q6CHQ3_YARLI | 66.48% | 534 | 0.0 | YALI0A06479p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_A06479g PE=4 SV=1 |
| A0A060T0V9_BLAAD | 66.54% | 535 | 0.0 | ARAD1C11550p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C11550g PE=4 SV=1 |
| A0A1E3PFU6_9ASCO | 65.36% | 534 | 0.0 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52613 PE=4 SV=1 |
| NLE1_YEAST | 62.87% | 536 | 0.0 | Ribosome assembly protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSA4 PE=1 SV=3 |
| UniRef50_P25382 | 62.87% | 536 | 0.0 | Ribosome assembly protein 4 n=170 Tax=saccharomyceta TaxID=716545 RepID=NLE1_YEAST |
| A0A1D8PM77_CANAL | 62.50% | 536 | 0.0 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.3778 PE=4 SV=1 |
| A0A1E4TD53_9ASCO | 50.75% | 536 | 0.0 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_142059 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0778
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
-
Repeat
1
50
100
150
200
250
300
350
400
450
500
534
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
-
cd00200 (WD40)
-
mobidb-lite (disord...)
Residue annotation
-
structural tetrad ...
Protein sequence
>MCA_01057_1 MATLVPPPSKRQKRELQAPKDLNEIPEDLPHVLIKFQASDSGESIGGSIRVPGSATEKQLETLLNKLIQQANNEEDSETT PYTFSLLKSEAKDDKSLPVLVDIVDNLYTSVLKPGHKTTEDQLTLVYTPRAVFKVRPINRSTSEISGHGSTILAAQFAPF SSSRMVTGAGDHTARIWDCDTQTPYRTLKGHTDWVLAVSWSPDGRYIATGSMDNSVRIWDPKTGKQIGKTLQGHDKWITS LSWEPLHLLKPKSGNGSRLASSSKDGTIRVWDVDRMLPLYTMSGHKSSVTHVKWSGLGDIYSTSQDKTVKVWSSKDGRLI TSLNAHAHWVNHIALSTDYSLRTGPFDWKSSGAVSPASKLDPNTTEGYDQLIELARKNFEKQATLNGQVSERVVTASDDF TILLWEPAKSSKPIAKMHGHQKAVNHVAFSPDGRYIASCSFDNSVKLWDGRDGKFIATLRGHVGAVYQCAWSSDCRLLVT CSKDTTLKVWDVRTKKLMSDLPGHKDQVYAVDWSVDGRKVASGGKDKHVRLWSH
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.