Protein
MIA_03084_1
Length
563 amino acids
Browser: contig04:198900-200639-
Protein function
| EGGNOG: | 0PFEV | FG01399.1 | splicing factor |
|---|---|---|---|
| SGD closest match: | S000002772 | CDC40 | Pre-mRNA-processing factor 17 |
| CGD closest match: | CAL0000174348 | orf19.6347 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_00540_1 | 55.962% | 629 | 0.0 | MCA_00540_1 |
| A0A1E3PHZ4_9ASCO | 48.475% | 590 | 0.0 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51634 PE=4 SV=1 |
| A0A060T5R6_BLAAD | 46.309% | 596 | 6.09e-160 | ARAD1C14630p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C14630g PE=4 SV=1 |
| Q6C7K4_YARLI | 49.900% | 499 | 1.68e-158 | YALI0D27346p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D27346g PE=4 SV=1 |
| UniRef50_Q6C7K4 | 49.900% | 499 | 3.89e-155 | YALI0D27346p n=2 Tax=Yarrowia lipolytica TaxID=4952 RepID=Q6C7K4_YARLI |
| A0A167D928_9ASCO | 59.409% | 372 | 2.21e-155 | Cdc40p OS=Sugiyamaella lignohabitans GN=CDC40 PE=4 SV=1 |
| A0A1E4TKN0_9ASCO | 42.795% | 458 | 7.39e-127 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_899 PE=4 SV=1 |
| A0A0J9X9T6_GEOCN | 48.670% | 376 | 3.02e-113 | Similar to Saccharomyces cerevisiae YDR364C CDC40 Pre-mRNA splicing factor OS=Geotrichum candidum GN=BN980_GECA07s00538g PE=4 SV=1 |
| A0A1D8PFH7_CANAL | 43.544% | 395 | 4.69e-107 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6347 PE=4 SV=1 |
| PRP17_YEAST | 40.327% | 367 | 3.21e-87 | Pre-mRNA-processing factor 17 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CDC40 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0208
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
-
Repeat
1
100
200
300
400
500
563
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
cd00200 (WD40)
-
mobidb-lite (disord...)
Residue annotation
-
structural tetrad ...
Protein sequence
>MIA_03084_1 MSLVPDYQSESDSEPDGLALVQKPTVSIVGVPTSQTALATLQEYRKTQKTYTKPAGPANPFDPLGPERVRKNIITGRMDK EAFDNATFEDNYRMFRRFGETTGPSEDNGDLKRKAQREQEKAVATKLKRKRLERGDSSVLDGEAAYKGPWAGYQKEQDES SSSESSEEEQAVVAPAVVAGPPQPTIPKEWTEFVGTQEYDYLGRTYMHIPQDLDVNLRKEPGSQETFVPKRKIHTWAGHS GGVNALRFFPYSGHLLLSCGNDTAIKLWDCHRNNREQLRVYHGHAKAVKDVAFNGVRGQLGGGTRFLSASYDKTIKLWDT ETGKVVQRYANLGRKSTGARAARAMANCVKFSPEADKQTEFLSGMSDNTILQWDTRLPPAEAVVQTYDHHLGPVNSITFV DEDRRFMTTSDDKSVRVWDWQINVPIKFIADPTQHAMPTVALHPSGKFVAAQSMDNRVLVFGALDKSKFRQNRRKEFHGH ACAGYPIQVAFSPDGKYLMSGDAHGYAFFWDWKTCALKAKLQVSGGGAGGSTEGSVVTCIAAHPQESSKVAVAGKDSVIT YWD
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.