Protein
MIA_03016_1
Length
341 amino acids
Browser: contig04:29363-30447-
Protein function
| EGGNOG: | 0PIUI | TFB4 | Transcription factor |
|---|---|---|---|
| SGD closest match: | S000006260 | TFB4 | RNA polymerase II transcription factor B subunit 4 |
| CGD closest match: | CAL0000195519 | orf19.4194 | TFIIH/NER complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_05877_1 | 65.579% | 337 | 3.23e-156 | MCA_05877_1 |
| A0A0J9X975_GEOCN | 60.286% | 350 | 1.95e-139 | Similar to Saccharomyces cerevisiae YPR056W TFB4 Subunit of TFIIH complex, involved in transcription initiation OS=Geotrichum candidum GN=BN980_GECA05s05697g PE=4 SV=1 |
| UniRef50_A0A0J9X975 | 60.286% | 350 | 3.99e-136 | Similar to Saccharomyces cerevisiae YPR056W TFB4 Subunit of TFIIH complex, involved in transcription initiation n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X975_GEOCN |
| A0A167EB47_9ASCO | 52.888% | 329 | 1.40e-110 | TFIIH/NER complex subunit TFB4 OS=Sugiyamaella lignohabitans GN=TFB4 PE=4 SV=1 |
| A0A060TDD0_BLAAD | 53.560% | 323 | 4.79e-105 | ARAD1B23760p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B23760g PE=4 SV=1 |
| A0A1E3PNW4_9ASCO | 50.147% | 339 | 3.20e-100 | Transcription factor Tfb4 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49442 PE=4 SV=1 |
| TFB4_YARLI | 48.137% | 322 | 8.00e-82 | RNA polymerase II transcription factor B subunit 4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TFB4 PE=3 SV=1 |
| TFB4_YEAST | 42.587% | 317 | 6.09e-79 | RNA polymerase II transcription factor B subunit 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFB4 PE=1 SV=1 |
| A0A1D8PPE3_CANAL | 37.791% | 344 | 3.34e-67 | TFIIH/NER complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4194 PE=4 SV=1 |
| A0A1E4TIU1_9ASCO | 37.255% | 306 | 2.25e-63 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_17690 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0214
Protein family membership
- TFIIH subunit Tfb4/p34 (IPR004600)
Domains and repeats
None predicted.
Detailed signature matches
Protein sequence
>MIA_03016_1 MNNVDDTSNSLKTSSLSSEDHPSLLAVIIETNPQAWTLIKDQISFKEAIQSLLVFINGHIAVNNQNQVCVIASHPDSAQF LYPINKIDPHAGTTFTTTVSEHLSTSTYSIAHAQSMYKQFRDVDEAVNKQLKKLFQLQENPTQPPHTNSKSSALSGALSL ALTYMNKVCAVSQESRMRSRILVLSVSSDLDAQYIPIMNSIFAAQSHRIPIDVCKLSGSPSFLQQACDSTNGVYMKIKHP HGLVQYLLSAYAIDPELRPHINLSTQRDVDFRATCFITKRVVDIGFVCSVCLCIMSIILPTNECPMCGTRFQKDAIKKLT VNPVVQPPKKKKKKKKETEGQ
GO term prediction
Biological Process
GO:0006289 nucleotide-excision repair
GO:0006355 regulation of transcription, DNA-templated
Molecular Function
None predicted.
Cellular Component
GO:0000439 core TFIIH complex