Protein
MIA_03001_1
Length
1,053 amino acids
Browser: contig03:2306977-2310174-
Protein function
EGGNOG: | 0QDZF | Reverse transcriptase (RNA-dependent DNA polymerase) | |
---|---|---|---|
CGD closest match: | CAL0000185137 | orf19.2669 | Uncharacterized protein |
Protein alignments
%id | Aln length | E-value | ||
---|---|---|---|---|
UniRef50_A5DXY5 | 47.705% | 501 | 2.01e-141 | Uncharacterized protein n=2 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DXY5_LODEL |
MCA_01665_1 | 38.911% | 496 | 9.76e-100 | MCA_01665_1 |
A0A161HJI4_9ASCO | 28.889% | 495 | 3.73e-55 | Gag-pol fusion protein OS=Sugiyamaella lignohabitans GN=AWJ20_4398 PE=4 SV=1 |
YCH4_YEAST | 37.324% | 284 | 1.79e-56 | Putative transposon Ty5-1 protein YCL074W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TY5A PE=5 SV=2 |
A0A1D8PLS1_CANAL | 25.357% | 560 | 4.65e-43 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2669 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0636
Protein family membership
None predicted.
Domains and repeats
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Domain
1
100
200
300
400
500
600
700
800
900
1000
1053
Detailed signature matches
no IPR
Unintegrated signatures
-
SSF56672 (DNA/RNA p...)
-
cd09272 (RNase_HI_R...)
-
mobidb-lite (disord...)
Residue annotation
-
active site cd09272
-
RNA/DNA hybrid bin...
Protein sequence
>MIA_03001_1 MDFYSRYSYVELLVKKSDASLAIRNYIARCESYFSGDSRGNRVSYFHSDNGGEYISKDLEQFFVSKGIKHTFTVPHTPQQ NGVAERLNRTLFEKPSLCFYSHAPDYLWGEAVKCANYLRNRLPSRTTGGVCPLQLWTGKPPSYQHMRVFGCRANVVIADA KRESKLSSNIDPGVFVGYSLDRTAYRVLVDSSIVEARDVYFDESQFPFMKSDKELSSNASGIAFGIGCGSGSMSGPRADC NDSGTGSSVGLNSIAGSNSSSGSSFGSRRSLPDVTSVSGSGSSASSTSGSTGSSPSPSLSSSPRSSSSLVVHKPRSVRRI LPSSSAPLESPTLPSLPSSPILPSSDQDPSVSSPIGPSQSDLSQVGSPSGESDNSGDSGISQRGGDIGFHPDVIASSPSP PSVELEIVPLDQEPPSSDLVKSLDQAGVSVDTKDDTQAILPKSRSRVVAVRLPSVTPAKRPSSHDFVAPPSKHRCDDSAK QPALSVVPAKRRAEQESISYRRLKSLRFEYDDVALLVFTDPTTFEQAMSSEDAEFWLEACVVEMSSLKRNRTWDLVDLPP GRKAINSKWVFKIKRKADGAIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNG DLKEDIYMRQPKGFIVKGQESKVCHLNKSLYGLKQAPLCWNEKIHGALVKLGFGRGSAMVIIALYVDDLLIAGNSTQAIA NTKSSLSSMFKMKDLGLVEQFLGMRVKQSPYHITVDVSRYIVDMLEEFGMQNCSSVKTPLPTRDLSDFSESDAAADPSLY RSIIGKLIYAANCARPDLAVAVSFLCRYMQNPKSMHMEAAKHTLRYLKGSAQLGLEYRAQKVYKLVGYSDADYAQDKQDR KSFTGYVFILSGGPITWACRKQVSPASSSVESEYMSLSDASKECFWINQLLSLCQIPVPLPVTMFEDNQGCIALAQNPVF HRRTKHIDVRYHVVRHYIRSGVIHLEYLDTQVMLADMFTKNLGRVKFETLRGLLGMKAVGDSATRGGVEHAMLSQTSACE NCWEIMVDGLCLF
GO term prediction
Biological Process
GO:0015074 DNA integration
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.