Protein
MIA_02782_1
Length
673 amino acids
Browser: contig03:1750229-1752315+
Protein function
| EGGNOG: | 0PHRN | CWC22 | Pre-mRNA-splicing factor cwc-22 |
|---|---|---|---|
| SGD closest match: | S000003510 | CWC22 | Pre-mRNA-splicing factor CWC22 |
| CGD closest match: | CAL0000192468 | CWC22 | Pre-mRNA-splicing factor CWC22 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9XC76_GEOCN | 67.537% | 536 | 0.0 | Similar to Saccharomyces cerevisiae YGR278W CWC22 Spliceosome-associated protein that is required for pre-mRNA splicing OS=Geotrichum candidum GN=BN980_GECA09s01143g PE=4 SV=1 |
| MCA_01510_1 | 70.280% | 535 | 0.0 | MCA_01510_1 |
| A0A167CLY9_9ASCO | 56.856% | 547 | 0.0 | Cwc22p OS=Sugiyamaella lignohabitans GN=CWC22 PE=4 SV=1 |
| UniRef50_J6F0T3 | 57.736% | 530 | 0.0 | Spliceosome-related protein n=7 Tax=Dikarya TaxID=451864 RepID=J6F0T3_TRIAS |
| A0A1E3PS81_9ASCO | 57.222% | 540 | 0.0 | MIF4G-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_68438 PE=4 SV=1 |
| A0A060T5M6_BLAAD | 58.856% | 542 | 0.0 | ARAD1B08140p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B08140g PE=4 SV=1 |
| CWC22_YARLI | 55.717% | 551 | 0.0 | Pre-mRNA-splicing factor CWC22 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CWC22 PE=3 SV=1 |
| A0A1E4TMH8_9ASCO | 40.408% | 490 | 2.44e-123 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_20522 PE=4 SV=1 |
| CWC22_CANAL | 38.104% | 538 | 1.22e-107 | Pre-mRNA-splicing factor CWC22 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CWC22 PE=3 SV=2 |
| CWC22_YEAST | 30.754% | 491 | 1.53e-61 | Pre-mRNA-splicing factor CWC22 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWC22 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1011
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
673
Detailed signature matches
-
-
SSF48371 (ARM repeat)
-
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MIA_02782_1 MADTETPNLAELEKEYQRLKDLRSGGRYVPPAKLRALEERLKLKQGPEDQQRRDWESLKKAINSLINKVNHGNIKTIVQE IFTHNLIRGRGLYCRSVMKAQALALPFTPVYAALTAIINSKLPIVGELLLTRLILQFRKAFRRNNKALCLSSVMFIAHLC NHQVAHEIVALQILHLLLEKPTDDSVELAVAFVKEAGAYLIETSKTAMAGVFDRFREVLHQGQIEKRTQYMVEVLFQIRK DEFKDNPAVPAELDLVEEDDQITHMIGLDDELKARDTLNVFKLDQNYEANEEKYANIKREILGDDDDEEDDEEESESEEE KEEEPPAGKPGIKDMTNAELLTLRKTIYLTIMSSMSVDEATHKLLKIKIPEGQEIELVNMIVEACSQEKIYNKTYGSVAA RLCYSGRVWRDLFGESFAHYYEIIHRYDTNQIRNIATLFGYILAADALGWEVFEVVHMNESESTSSSRIFIKIVFEEMKM ELGSKKLAERFREEYMQPFLVNMFPKGKNAEDVRFSINYFTAIGLGVLTEDMREYLKNMPPPEEEDEEEGKRTPSYGDGY DDGRDSPSPRGERSASPGSPNPVVVANFPDAALARVPEEEQVGGIRQVLVPNAVAVAGETHQKETAAIPLTEKISMVAAT VAAAQATTTEAVAEMTQSARVLHLLIAAALREA
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003723 RNA binding
GO:0005488 binding
GO:0005515 protein binding
Cellular Component
None predicted.