Protein

MIA_02662_1

Length
927 amino acids

Browser: contig03:1389976-1392760-

Protein function

EGGNOG:0PHC8FG10795.1Cleavage and polyadenylation specificity factor
SGD closest match:S000004105CFT2Cleavage factor two protein 2
CGD closest match:CAL0000193340orf19.325Cleavage polyadenylation factor subunit

Protein alignments

%idAln lengthE-value
MCA_04103_159.448%9420.0MCA_04103_1
A0A0J9X511_GEOCN47.515%10060.0Similar to Saccharomyces cerevisiae YLR115W CFT2 Subunit of the mRNA cleavage and polyadenlylation factor (CPF) OS=Geotrichum candidum GN=BN980_GECA02s08612g PE=4 SV=1
UniRef50_A0A0J9X51147.515%10060.0Similar to Saccharomyces cerevisiae YLR115W CFT2 Subunit of the mRNA cleavage and polyadenlylation factor (CPF) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X511_GEOCN
A0A060T6A2_BLAAD44.690%9510.0ARAD1C12386p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C12386g PE=4 SV=1
A0A167C7P3_9ASCO44.422%9770.0Cft2p OS=Sugiyamaella lignohabitans GN=CFT2 PE=4 SV=1
A0A1E3PT15_9ASCO37.328%9430.0Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_7619 PE=4 SV=1
Q6CAZ0_YARLI34.031%7173.90e-110YALI0C23232p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C23232g PE=4 SV=1
A0A1D8PJN1_CANAL26.993%10414.95e-90Cleavage polyadenylation factor subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.325 PE=4 SV=1
CFT2_YEAST31.866%4771.89e-52Cleavage factor two protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CFT2 PE=1 SV=1
A0A1E4TDQ2_9ASCO24.576%3542.02e-22Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_97122 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1177

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 600 700 800 927

Detailed signature matches

  1. Domain IPR001279
    Metallo-beta-lactamase
    1. PF16661 (Lactamase_B_6)
    2. G3DSA:3.60.15.10
    3. SSF56281 (Metallo-h...)
  2. Domain IPR035639
    CPSF2, metallo-hydrolase domain
    1. cd16293 (CPSF2-like...)
  3. Domain IPR022712
    Beta-Casp domain
    1. PF10996 (Beta-Casp)
    2. SM01027 (Beta_Casp_2)
  4. Domain IPR025069
    Cleavage and polyadenylation specificity factor 2, C-terminal
    1. PF13299 (CPSF100_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. mobidb-lite (disord...)

Residue annotation

  1. active site cd16293
  2. putative RNA bindi...

Protein sequence

>MIA_02662_1
MFSFTRLQPTSPENRAMAGPKSDSLAQEINQSLLSFPPDFTLLVDVGWDPALSMDLTHLITAAPTIDAILLTHATLSHLG
AYAYLCKMSTEFNNVPVYSTLPVINMGRMITLDSYRSKGLLGPFLDEKITLEDVEAAFDKIIPLKYSQTVTLDPNAKMLT
SASKAEAEKPKKKKDSALANINFSGSVQITPFNAGHTLGGTIWKIAKDQEVIIYSVDWNHSRDSHLNGAFVQDNLIDALS
KPSLMICGTKLSQISSNLKNRKDSLFRNIRETIEAGGTVLIPTSTGSRVLELVHILDAYWEEKKISAPLLYFSHVGNRTL
SYASSMLEWMSSTLIDEWQVQNNSPFDTKHLKIMSSIDELEKYDGPKVVLASGEAMEVGFSRQLFSEVCSQDSSMVILTE
RCGPETLAGQLFELWTEERLVSDDPQNSSSKYLPAHLTTQINLDLDIEKALAGEERVDYLEKVQEKRKNQELQSAIELRN
KNILEQETTELSDDDDDDDEDEMIMSGQMDVSILIYGKDVYDYDVRTMPKSKPRMFPFALKRRRVDDYGEVLKLDQFSKI
AEKEEAEKAAALSGPAPVVHSNNQKKDESEQTTSLSTNTQYNDETFRLDSFSTIAKPTKIVPKSATFKVLCHLDFIDFDG
VTDARSLKMILELVKPRQLIFLPSSLDIRDPRISLKTQPPPTNIDEIVTEYEEAAAEMKLELITKAPANEAIITQFCSNS
YSLIISPELEKMLKWQKITGDYSVAQVMGKLEVSSLDAPEHAQPQEKEGEDTKVKEEAAATDQASSKTSDEPNKIEKDAP
LAVKTEDAEDTLELTRVALNNGLSSHLVRNQPKSVVRLVPLQGTDDFALARAHATGPVTVGDIRLAELKRQLVALGHRAE
FKAEGILVCDNKVAVRKLTQGNIVVEGGTGPEFYKVKGIIRSLLAYV

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.