Protein

MCA_04103_1

Length
880 amino acids

Browser: contigC:2024341-2026984-

RNA-seq: read pairs 2477, FPKM 34.7, percentile rank 56.9% (100% = highest expression)

Protein function

KEGG:K14402CPSF2 cleavage and polyadenylation specificity factor subunit 2
EGGNOG:0PHC8FG10795.1Cleavage and polyadenylation specificity factor
SGD closest match:S000004105CFT2Cleavage factor two protein 2
CGD closest match:CAL0000193340orf19.325Cleavage polyadenylation factor subunit

Protein alignments

%idAln lengthE-value
MIA_02662_159.36%9400.0MIA_02662_1
A0A167C7P3_9ASCO45.28%9430.0Cft2p OS=Sugiyamaella lignohabitans GN=CFT2 PE=4 SV=1
UniRef50_A0A167C7P345.28%9430.0Cft2p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167C7P3_9ASCO
A0A060T6A2_BLAAD46.06%9140.0ARAD1C12386p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C12386g PE=4 SV=1
A0A0J9X511_GEOCN59.21%5540.0Similar to Saccharomyces cerevisiae YLR115W CFT2 Subunit of the mRNA cleavage and polyadenlylation factor (CPF) OS=Geotrichum candidum GN=BN980_GECA02s08612g PE=4 SV=1
A0A1E3PT15_9ASCO39.75%8930.0Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_7619 PE=4 SV=1
Q6CAZ0_YARLI33.84%8512e-142YALI0C23232p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C23232g PE=4 SV=1
A0A1D8PJN1_CANAL33.18%4494e-69Cleavage polyadenylation factor subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.325 PE=4 SV=1
CFT2_YEAST33.11%4441e-54Cleavage factor two protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CFT2 PE=1 SV=1
A0A1E4TDQ2_9ASCO24.66%3651e-23Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_97122 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.2889

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 600 700 800 880

Detailed signature matches

  1. Domain IPR001279
    Metallo-beta-lactamase
    1. PF16661 (Lactamase_B_6)
    2. G3DSA:3.60.15.10
    3. SSF56281 (Metallo-h...)
  2. Domain IPR035639
    CPSF2, metallo-hydrolase domain
    1. cd16293 (CPSF2-like...)
  3. Domain IPR022712
    Beta-Casp domain
    1. PF10996 (Beta-Casp)
    2. SM01027 (Beta_Casp_2)
  4. Domain IPR025069
    Cleavage and polyadenylation specificity factor 2, C-terminal
    1. PF13299 (CPSF100_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Residue annotation

  1. active site cd16293
  2. putative RNA bindi...

Protein sequence

>MCA_04103_1
MFSYTSLQPKRSKDSAYIGPKAQSLSKEVHQSLLTFPPNFSILIDVGWDPALSLDLDYLVTAAHSINAILLTHASITHLG
AYSYLCKISPEFAKIPVYSTLPVINMGRMVTLDAYRSKGLLGPVVGSEITLEDVEASFDKVIPLKYSQTVTLDPNSQDSA
SGVSSEGTIQITPYNAGHSLGGTIWKIVRSQAVILYAVDWNHTRDSHLNGAFLQSDGSLLEPLAKPSLMICGTKISEISS
TLKKRKEALFKNVRETIASGGTVLIPTSTGSRVLELVHILDSFWEKEHISAPLLYFSHVGSRTLSYASSMLEWMSSTVID
EWQVQNQSPFDTKHLKVLSSTEELMKMDGPKVILASGEAMEVGFARQMFSKICNNDSSMVIITERSGPETLAGQLFDIWM
KQKRESNDPSNSSKYLPVHLTTEILLDYTEEAPLSGEELVDYLETTREEKKQIELQSAIELRNKNILEQDDNEMSDDESD
EQEDEMVMSGQMDIGIFLYGNDVYDYDVRTMPEGKPRVFPYNVNRKRVDDYGEVLKLEKFLKKKQQEEAEKAIVKPDPPT
ADQNKKNATVVKTQYNDETNRLNVFSSIVAPQKIVPKETDLKVLCWLDFIDFDGVTDWRSLKMILDLIEPRNLIFLPSCL
DIKPYSEDTEMGDDGDDSTNKSTSETNVDRILADFQQQADMNLDLIAKAIPNEAIFTQIGSNTYSVIISPELEKLLKWQK
ILGDFSVAHVTGKLEVTTVANNNNNKAGQQQKAIQDVVMEGDDDTKALSETVAELSSSQVVQPPTSTTVVKLVPLKTAQD
FANAPRSNPLMVGDIKLAELKRLLISKGHKAEFRAEGILVCDEKVAIRKLAQGNIVVEGTGISPEFYKVRNVVRSILAYV

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.