Protein

MIA_02634_1

Length
1,106 amino acids

Browser: contig03:1306993-1310314-

Protein function

EGGNOG:0PGSXSMC5Structural maintenance of
SGD closest match:S000005394SMC5Structural maintenance of chromosomes protein 5
CGD closest match:CAL0000199747SMC5DNA repair ATPase

Protein alignments

%idAln lengthE-value
MCA_04199_141.242%10790.0MCA_04199_1
A0A0J9X8A4_GEOCN39.037%11220.0Similar to Saccharomyces cerevisiae YOL034W SMC5 Structural maintenance of chromosomes (SMC) protein OS=Geotrichum candidum GN=BN980_GECA04s03233g PE=4 SV=1
UniRef50_A0A0J9X8A439.037%11220.0Similar to Saccharomyces cerevisiae YOL034W SMC5 Structural maintenance of chromosomes (SMC) protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X8A4_GEOCN
A0A060T412_BLAAD33.394%11083.10e-152ARAD1A13508p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A13508g PE=4 SV=1
A0A1E3PGQ6_9ASCO31.221%10892.58e-151p-loop containing nucleoside triphosphate hydrolase protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_9252 PE=4 SV=1
A0A167E2E0_9ASCO31.822%10812.90e-139DNA repair ATPase SMC5 OS=Sugiyamaella lignohabitans GN=SMC5 PE=4 SV=1
Q59UE8_CANAL29.498%10953.88e-119DNA repair ATPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SMC5 PE=4 SV=1
A0A1E4TDV6_9ASCO31.938%6452.22e-81Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_1669 PE=4 SV=1
SMC5_YEAST27.527%6432.47e-61Structural maintenance of chromosomes protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMC5 PE=1 SV=1
Q6C5K8_YARLI27.576%6892.70e-38YALI0E17193p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E17193g PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0489

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 200 400 600 800 1000 1106

Detailed signature matches

  1. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  2. Domain IPR003395
    RecF/RecN/SMC, N-terminal
    1. PF02463 (SMC_N)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:1.20.11...
  3. G3DSA:3.40.50...
  4. cd03277 (ABC_SMC5_euk)

Residue annotation

  1. Walker A/P-loop cd...
  2. ATP binding site c...
  3. Q-loop/lid cd03277
  4. ABC transporter si...
  5. Walker B cd03277
  6. ATP binding site c...
  7. D-loop cd03277
  8. H-loop/switch regi...

Protein sequence

>MIA_02634_1
MTVNGGAEYDIMEGYTDPLTSNGTASIHEYRSPDGYEPGAIRKIILIDFVTYRHAEFSIGPSLNMIIGPNGSGKSTIVCA
ICLGLGGKPEILGRSKLPSQFIKHGASTATIIIELQGFEGTPNVRITRIITGNNSSWKINNRHATQSEILKTVEKFNIQI
NNLCQFLPQDRVANFAQLPSTELLIETERAVGERTLIEQHRKLIELDQERNSDQTSLEAEMKILSDKEKLQAQDQAIIEK
IEERKKNIARSHVLRAGLQAITYRVAREEVTLSKKRINELEARYETLKERAYYFENKKQSYLDLAREINHDQSELKRQRS
SVRDIINNQMDQITLTLSEISKIEQKIKALRNTQKRKKLERLDLENELNAIDNMIKTLPVYDEAELVRINEESIQCKENI
RSIEDEINGFEDKKNLAKRKKDKLKRDFSNLNAELRQLESDQQMRMVFLSEQSDDIWRHVYQAVKWLENNRDKFKERIYL
PPILSLTYKYPNLLQFLNANIDKLSMATFTALNREDYLRFGELVSDELKINVPIKEFSGTNKPTLAHQDVFYAPEELEKF
GFDGTILNLIMGPGPVLNMLCHNCKINQTPFASKLLTEEQMEYIDHASKHNGDPIFTKYMDPEFLCTSVRSTYGQRNVSF
SKVSLSRAPGYFIASGQNKDRIKRVKEEMEKLSTSMKELETGTTDYDEQIGELKRRSLPLLDVQNALSDRRKKLWEIKKQ
MRMAEEKKNIVQDKLNRFVEHVPEEEFDRLENDLQRRIKNIADLTSEFSDPLDSQIFISKKYMTNLIELDSVNNASDCYH
RFSLTGIAELEEQLQNARNELSELTYKFKAAKHAVKESRKELDDDQLAQVKDIHDDVTITSESLQLELAKIEMDLKSSTD
HLSDSTITRFEKRQVEIEALREKVSKLEKKSKHFNSAIEKIRDVWEPELRRIVATISEAFTQAFQRINCRGEVRLGNTDC
PFSEWSIDIMVSFRQGTELQVLTHQLQSGGERAVSTIFYLISLQRITKSPFRVVDEINQGMDPRNERVVHSHMVHVACEE
NSSQYFLVTPKLLQDLEYHPKMKVQFIFSGNKVVDISEYEHPPTRFSYILQKARERNRAEAMAGGE

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.