Protein
MIA_02573_1
Length
469 amino acids
Browser: contig03:1162630-1164115+
Protein function
| EGGNOG: | 0PIVD | FG05417.1 | Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1 |
|---|---|---|---|
| SGD closest match: | S000004961 | PUB1 | Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 |
| CGD closest match: | CAL0000199799 | orf19.7368 | Uncharacterized protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_03887_1 | 76.650% | 197 | 2.44e-104 | MCA_03887_1 |
| A0A0J9X6Z6_GEOCN | 68.254% | 189 | 1.17e-90 | Similar to Saccharomyces cerevisiae YNL016W PUB1 Poly (A)+ RNA-binding protein, abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs OS=Geotrichum candidum GN=BN980_GECA04s01594g PE=4 SV=1 |
| UniRef50_A0A0J9X6Z6 | 68.254% | 189 | 2.39e-87 | Similar to Saccharomyces cerevisiae YNL016W PUB1 Poly (A)+ RNA-binding protein, abundant mRNP-component protein that binds mRNA and is required for stability of many mRNAs n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9X6Z6_GEOCN |
| A0A1E3PK19_9ASCO | 60.000% | 185 | 2.88e-73 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_41775 PE=4 SV=1 |
| A0A060T2H2_BLAAD | 51.980% | 202 | 2.00e-68 | ARAD1A01672p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A01672g PE=4 SV=1 |
| A0A1D8PKD0_CANAL | 56.452% | 186 | 6.75e-66 | Uncharacterized protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.7368 PE=4 SV=1 |
| PUB1_YEAST | 51.934% | 181 | 3.02e-57 | Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUB1 PE=1 SV=4 |
| Q6CCS0_YARLI | 51.667% | 180 | 1.76e-53 | YALI0C07040p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C07040g PE=4 SV=1 |
| A0A167EEF7_9ASCO | 66.990% | 103 | 1.77e-43 | Pub1p OS=Sugiyamaella lignohabitans GN=PUB1 PE=4 SV=1 |
| A0A1E4THK5_9ASCO | 33.143% | 175 | 2.32e-21 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_25868 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0195
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
350
400
469
Detailed signature matches
-
-
SM00361 (rrm2_1)
-
no IPR
Unintegrated signatures
-
-
cd12619 (RRM2_PUB1)
-
mobidb-lite (disord...)
Protein sequence
>MIA_02573_1 MSAESTTAQQQPSVATESPVVSASSEVSSISGKQVNPISASPSTSAAVSAASNDADAVTPETSAPGTAGPEDVEGPAPAN ASQGGREINKKVLYVGNIDQHVTEDMLNEVFRVTGNVLSIKIFPDKNKRSFNYAFVEYSDPSGAELALNTLNGRALNQTE IKINWAYQSLNVTKTPELFNVFVGDLSSEVDDDSLAKAFAAFGSMSDAHVMWDMTTGRSRGYGFVTFHNQEDAMRAIDRM NGEWLGSRTIRCNWASQRIPQQQQQYHHNNHHQYHRNDGGNNHNGYHHHQQQQQQQQQQQQQIPLQFSNQQQLYFTNNNG NNGLQQAYDGQQQQQQQLQPQQQPQQQFLGQISPIGSQQPVQVNLPYDVVLRQTPNWQTTVYLGNIPGYTVPNDLLPILQ NFGFVVDFKYQQDREYAFIKYDTHEHAALAISQLSGLQFNGRTLRCGWGKDRNNHHNQYQGYGGRQYNR
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.