Protein
MIA_02402_1
Length
844 amino acids
Browser: contig03:704373-706908+
Protein function
| EGGNOG: | 0PI3T | CCM1 | RNA-binding protein involved in the specific removal of group I introns in mitochondrial encoded transcripts. Maintains the stability of the small subunit mitochondrial 15S rRNA and thus the expression of the mitochondrial genome (By similarity) |
|---|---|---|---|
| SGD closest match: | S000003382 | CCM1 | Mitochondrial group I intron splicing factor CCM1 |
| CGD closest match: | CAL0000174731 | CCM1 | Mitochondrial group I intron splicing factor CCM1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_01568_1 | 49.932% | 733 | 0.0 | MCA_01568_1 |
| A0A0J9X9Z8_GEOCN | 46.187% | 695 | 0.0 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA07s01946g PE=4 SV=1 |
| UniRef50_A0A0J9X9Z8 | 46.187% | 695 | 0.0 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9Z8_GEOCN |
| A0A167F9S0_9ASCO | 39.076% | 714 | 2.28e-163 | Ccm1p OS=Sugiyamaella lignohabitans GN=CCM1 PE=4 SV=1 |
| A0A060TCT2_BLAAD | 36.729% | 697 | 3.37e-150 | ARAD1D45540p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D45540g PE=4 SV=1 |
| A0A1E3PPX0_9ASCO | 30.147% | 408 | 2.26e-56 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45566 PE=4 SV=1 |
| CCM1_YARLI | 25.589% | 637 | 1.62e-52 | Mitochondrial group I intron splicing factor CCM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CCM1 PE=3 SV=1 |
| CCM1_CANAL | 26.167% | 600 | 3.46e-42 | Mitochondrial group I intron splicing factor CCM1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CCM1 PE=3 SV=1 |
| A0A1E4TET7_9ASCO | 24.749% | 299 | 1.29e-26 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_1999 PE=4 SV=1 |
| CCM1_YEAST | 23.256% | 516 | 1.11e-21 | Mitochondrial group I intron splicing factor CCM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCM1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9783
Predicted cleavage: 36
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Repeat
1
100
200
300
400
500
600
700
844
Detailed signature matches
-
-
PF17177 (PPR_long)
-
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MIA_02402_1 MLRFRNSLFASGYFPRWTQIHSRSIFISSRQPKRPVSAPVADRPSSDSMSKHDRFSVLGSFANELDDSIARNLHRNNPSS LSDPPPRSPSISSKPLSKNLSAASALFLQSLKQGTTLSPSSSTSQGRRRRRRPTLIDHQRAKELDRQIKQVEMYANNLKH QIRMRDERALQLEKLQEETEKYDKSAQGKNNGQKALSQVSSDADKIMDFLELPEDEAHSQLTKKPLTSSSLKEIKTSMFE IPASTVKLPHAILDRIGHAVTAIASESHQDWSRVVAAIFNNPNQLSGISSDEVSLLMKQIPLPQRAKVLPLLHEMIWDAE IPLTKYIYDATIAAYAEQGNTALVQVFLDQMNADKITPDHHTYGNLVKCMAKNRDLEGAVQVTKEMQAKKIALSIPIYTS LLQTCINVGDYNQAFDVFDMLKFLGTEMQPDVPVYNSVMLAASKQQNINRVLDLYNEMTTRAIDPLRPDANTYSILIYAC ARDEKTHIKAWHLLLEMQERGFAPDRSTLNVMLYLCGKTGELVFARSIFRQMCTDKASYPDAFALNCLLDAYANYKPGFF SPILSTALGTKLRSAFFYNLDIAASTPTEITPPFLPAPMLSNKLQVLAESRAVYSFFRDMQFGHSEAHERARRMLNPETG VVRFINERTALTYLRVPANLGNEAEFNFRWIHETCIKTHMEKGKRILLPYKDTKQPELQTVEQSSEPQNTPEQEFTKTPR NHYMYDLAIRTATKNLWPYKSVRSIWESRGEWRRSPQSTYWATMNDVERRHSDFLFARGMVEYLARTRKLFDAVDIVQSS VKLFRWRKAHLIPIIDAAREIEDEATLRKIKKILASYRQNDDDI
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.