Protein
MCA_01568_1
Length
861 amino acids
Gene name: CCM1
Description: Mitochondrial group I intron splicing factor CCM1
Browser: contigA:4850911-4853497-
RNA-seq: read pairs 491, FPKM 7.0, percentile rank 20.6% (100% = highest expression)
Protein function
| Annotation: | CCM1 | Mitochondrial group I intron splicing factor CCM1 | |
|---|---|---|---|
| EGGNOG: | 0PI3T | CCM1 | RNA-binding protein involved in the specific removal of group I introns in mitochondrial encoded transcripts. Maintains the stability of the small subunit mitochondrial 15S rRNA and thus the expression of the mitochondrial genome (By similarity) |
| SGD closest match: | S000003382 | CCM1 | Mitochondrial group I intron splicing factor CCM1 |
| CGD closest match: | CAL0000174731 | CCM1 | Mitochondrial group I intron splicing factor CCM1 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02402_1 | 49.66% | 733 | 0.0 | MIA_02402_1 |
| A0A0J9X9Z8_GEOCN | 51.11% | 450 | 2e-150 | Uncharacterized protein OS=Geotrichum candidum GN=BN980_GECA07s01946g PE=4 SV=1 |
| UniRef50_A0A0J9X9Z8 | 51.11% | 450 | 5e-147 | Uncharacterized protein n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X9Z8_GEOCN |
| A0A167F9S0_9ASCO | 46.77% | 449 | 3e-127 | Ccm1p OS=Sugiyamaella lignohabitans GN=CCM1 PE=4 SV=1 |
| A0A060TCT2_BLAAD | 36.09% | 557 | 5e-109 | ARAD1D45540p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D45540g PE=4 SV=1 |
| A0A1E3PPX0_9ASCO | 31.60% | 405 | 5e-55 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45566 PE=4 SV=1 |
| CCM1_YARLI | 30.09% | 452 | 1e-45 | Mitochondrial group I intron splicing factor CCM1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CCM1 PE=3 SV=1 |
| CCM1_CANAL | 26.72% | 393 | 2e-34 | Mitochondrial group I intron splicing factor CCM1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CCM1 PE=3 SV=1 |
| A0A1E4TET7_9ASCO | 29.74% | 232 | 5e-28 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_1999 PE=4 SV=1 |
| CCM1_YEAST | 23.18% | 755 | 2e-23 | Mitochondrial group I intron splicing factor CCM1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCM1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9909
Predicted cleavage: 40
Protein family membership
None predicted.
Domains and repeats
-
Repeat
1
100
200
300
400
500
600
700
800
861
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_01568_1 MFCNRLVRSQVSKHKSLILKNQHRCIILPTSSSKSPKRLDSFSNNSTVIPSSQEKKPLSHSKNVFDSLATEFRSLNDKSL TKNIKLTEILQPKLHTAQSSTRRRAPRRRSPSKEDVAGKQEELLVEQQIRQMEKYASELKRQIKLKDEYELQQKKLKEEM EKHESKIKNENLPSVATAAPGEEGAVDTLMDFLDMPETHAQQELDIVLEKEPISNAKKSKTQSFQDLKRSLFALPAPSIS LPEPILERMGPAVHAIASEHNQDWSKVVSHLYMSKEKFVGLSSDEVSVFIKQIPLNQRAPLLPVIHEMIWDAGIPLTKYI YDNTLAGYAEVGETSTIRSFIMQMEQDPNITVDHYTYAHLLKSLNKNSDLELSVITLKEMQDKKIQLTTPIYTTLLQTCI KVKDYDQAFQVFDMLKFMSTSTLPDTKVYNSVILAAAKQHNVNRVLDLYKEMTTRPIDPLQADQETYTLLIYACSRDKTT HLKAWHYLIEMYERGFPPSRSSLNSMLYLCGQTGEVSFARAIFRQMCSDPATYPDPFSFNSLLLAYTNFQPGFLSPILGT AVGPKLRASFFSNLDIFSSVPSEITPPFLPFVSLANKLQVLAESRAIYGFFKDLQWGTEEAHKRAREILKADNNSDKELN YINANTAFTYLKIPLALNNEPEFKFRWRTETCVSGEKSFLQEEFLSSSKTKTNSSNKLENEQILDNDLENQETEQEQESN EKKNNNIVKKEQQQQHLLNRVPRTSFMYNAAIEAHTVHKWPYASAKQIWESRGNWRRDPTSLFNTQMTADQRKSSDFVFA RNMVAYLAADKRVQEGLDLIRSTTQRFPWKKRHVLSLIDAANEMQDTSMVNKIKGVFHTGY
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.