Protein
MIA_02394_1
Length
1,002 amino acids
Browser: contig03:680300-683508+
Protein function
| EGGNOG: | 0PFR9 | MSH1 | DNA mismatch repair protein |
|---|---|---|---|
| SGD closest match: | S000001162 | MSH1 | DNA mismatch repair protein MSH1, mitochondrial |
| CGD closest match: | CAL0000200606 | CAALFM_CR04120CA | Mismatch repair ATPase |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_01863_1 | 40.869% | 1013 | 0.0 | MCA_01863_1 |
| A0A0J9XI97_GEOCN | 42.646% | 945 | 0.0 | Similar to Saccharomyces cerevisiae YHR120W MSH1 DNA-binding protein of the mitochondria involved in repair of mitochondrial DNA OS=Geotrichum candidum GN=BN980_GECA18s01198g PE=4 SV=1 |
| UniRef50_A0A0J9XI97 | 42.646% | 945 | 0.0 | Similar to Saccharomyces cerevisiae YHR120W MSH1 DNA-binding protein of the mitochondria involved in repair of mitochondrial DNA n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XI97_GEOCN |
| A0A1E3PTH7_9ASCO | 35.586% | 947 | 5.34e-178 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_20105 PE=4 SV=1 |
| A0A060T1F0_BLAAD | 36.436% | 999 | 2.22e-170 | ARAD1C16038p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C16038g PE=4 SV=1 |
| MSH1_YEAST | 35.219% | 937 | 1.01e-166 | DNA mismatch repair protein MSH1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSH1 PE=1 SV=2 |
| A0A1D8PSP4_CANAL | 35.637% | 926 | 1.11e-158 | Mismatch repair ATPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR04120CA PE=4 SV=1 |
| A0A167D1C4_9ASCO | 35.363% | 854 | 1.79e-145 | Mismatch repair ATPase MSH1 OS=Sugiyamaella lignohabitans GN=MSH1 PE=4 SV=1 |
| A0A1E4TCE1_9ASCO | 32.979% | 940 | 1.24e-136 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_15349 PE=4 SV=1 |
| Q6CF53_YARLI | 33.051% | 944 | 1.01e-126 | YALI0B10197p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B10197g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.9903
Predicted cleavage: 34
Protein family membership
- DNA mismatch repair protein MutS/MSH (IPR017261)
Domains and repeats
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Domain
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Domain
1
100
200
300
400
500
600
700
800
900
1002
Detailed signature matches
no IPR
Unintegrated signatures
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-
-
-
NON_CYTOPLASM... (N...)
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SIGNAL_PEPTIDE (Sig...)
-
SIGNAL_PEPTID... (S...)
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SIGNAL_PEPTID... (S...)
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SIGNAL_PEPTID... (S...)
Protein sequence
>MIA_02394_1 MIPLVRRKTFPLAVVWARTAAARSIQTKSRARNPPKLEILTLEQLDYDENGNKIEVPKSIQMIPLDPGESLPIRPEEFPP LAGNSPGNLLEQIRRAIDSHPGSVVLTQVGSFYEIYFEQAEEYGPKLGLRIAKKKVGSRTNPYTYPMSGFPLYQLGKYLR VLVQELQIPVAIYDQYDKDPPVDMLLTRSGSKFNRELTRFVTPGTLLDESFMDWRSNNYLLSVVLPEPSNQDGTIPDDAP IGLAWVNLGVGSFYVESTTAAGLVSLLARIQPTEVLVDKSIFPEEAPAEAFSKLNQEFSGIEGFYMRAVPFNLRNQLSFC AEVLGKDLDSMSQTLHAMTPPERHAVVVILKYIKKNLPKYPVSLQLPERKKSSSIMKIDIRSRHALELLKPMRDGYAKTG TLLSSIKKTVSDSGTRLLTEWIKEPSLELDEINKRHQIVEELLINRHFLDRLRDYIQSTEDPARVIQKFGLGKGTIMDLY TLAQDLEVFHTIRKEIKAAKHLPRRKSQLKEMMSSFVSCNDITKAILSDIHESVLQQSCEEESVDDISLEDNFDPEAALK RAASIETALTPPKSRTANDIDDWVIKPSASRALKNLHKRLEQAKIRVEELETYFKERYQDRGLTPVLKWNTSIGYHISLV GRPTDTSIHPDDLAHIHTRHKNSATMHNAEWLELGTRTDEIRMEIRQEERAIMNALKKKVLEKKLDLIANCHLIDRLDVL SGFAILAADRHLVRPKMNESTVTNIEQGRHLFVEQGLFNKNKTFTPNGCSIGAPQFPNTWLITGPNMGGKSTFLRQVALI SVLAQIGSFVPATHAELGIVDQIFCRVGAGDSLFNGESTFMVEMKETINILSGATPRSLAVLDEVGRGTSSRDGVSIAFA TLVHLSQVNRCRTLFATHFGPELHALISQKEGPGAALQTDIGYYCTQILIPDLPQLENATEQQKNDRFYNEGVIFNHSLV KGICDDSHGLRIAVLAKIPRKAFDYARYALNQLPQETIQIDT
GO term prediction
Biological Process
GO:0006298 mismatch repair
Molecular Function
GO:0005524 ATP binding
GO:0030983 mismatched DNA binding
Cellular Component
None predicted.