Protein
MIA_02378_1
Length
84 amino acids
Browser: contig03:652427-652826+
Protein function
| EGGNOG: | 0PQQQ | Small nuclear ribonucleoprotein | |
|---|---|---|---|
| SGD closest match: | S000002965 | SMX2 | Small nuclear ribonucleoprotein G |
| CGD closest match: | CAL0000189797 | orf19.836.1 | mRNA splicing protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_01814_1 | 77.465% | 71 | 6.69e-36 | MCA_01814_1 |
| A0A0J9X605_GEOCN | 71.831% | 71 | 4.28e-33 | Similar to Saccharomyces cerevisiae YFL017W-A SMX2 Core Sm protein Sm G OS=Geotrichum candidum GN=BN980_GECA03s04850g PE=4 SV=1 |
| UniRef50_A0A1S1W627 | 63.768% | 69 | 6.42e-26 | Small nuclear ribonucleoprotein n=22 Tax=leotiomyceta TaxID=716546 RepID=A0A1S1W627_9PEZI |
| A0A060TIF8_BLAAD | 61.972% | 71 | 1.16e-28 | ARAD1D46222p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D46222g PE=4 SV=1 |
| A0A1E3PMF9_9ASCO | 50.000% | 78 | 2.71e-24 | Putative small nuclear ribonucleo protein G OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51390 PE=4 SV=1 |
| A0A1D8PH20_CANAL | 55.224% | 67 | 1.19e-23 | mRNA splicing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.836.1 PE=4 SV=1 |
| RUXG_YEAST | 50.704% | 71 | 2.35e-21 | Small nuclear ribonucleoprotein G OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMX2 PE=1 SV=1 |
| A0A1E4TKU1_9ASCO | 55.556% | 63 | 1.92e-21 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_21266 PE=4 SV=1 |
| B5RSM6_YARLI | 29.487% | 78 | 4.19e-07 | YALI0F30426p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F30426g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2981
Protein family membership
- Small nuclear ribonucleoprotein G (IPR034098)
Domains and repeats
-
Domain
1
10
20
30
40
50
60
70
84
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
heptamer interface...
-
Sm1 motif cd01719
-
RNA binding site c...
-
Sm2 motif cd01719
Protein sequence
>MIA_02378_1 MVKAATPEFRKYLDKKVLVQLNGSRKIKGVVRGYDLFLNIVIDEAVEEKQNGDVVKVGIAVIRGNSITSIEVYMNLSHYI LTVY
GO term prediction
Biological Process
GO:0000387 spliceosomal snRNP assembly
Molecular Function
None predicted.
Cellular Component
GO:0005681 spliceosomal complex