Protein
MCA_01814_1
Length
77 amino acids
Browser: contigA:5520348-5520826-
RNA-seq: read pairs 459, FPKM 72.7, percentile rank 73.4% (100% = highest expression)
Protein function
| KEGG: | K11099 | SNRPG | small nuclear ribonucleoprotein G |
|---|---|---|---|
| EGGNOG: | 0PQQQ | Small nuclear ribonucleoprotein | |
| SGD closest match: | S000002965 | SMX2 | Small nuclear ribonucleoprotein G |
| CGD closest match: | CAL0000189797 | orf19.836.1 | mRNA splicing protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X605_GEOCN | 77.63% | 76 | 2e-37 | Similar to Saccharomyces cerevisiae YFL017W-A SMX2 Core Sm protein Sm G OS=Geotrichum candidum GN=BN980_GECA03s04850g PE=4 SV=1 |
| MIA_02378_1 | 77.46% | 71 | 1e-34 | MIA_02378_1 |
| A0A060TIF8_BLAAD | 71.05% | 76 | 5e-34 | ARAD1D46222p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D46222g PE=4 SV=1 |
| UniRef50_G0SI53 | 67.12% | 73 | 7e-28 | Putative small nuclear ribonucleoprotein n=6 Tax=Eukaryota TaxID=2759 RepID=G0SI53_CHATD |
| A0A1E3PMF9_9ASCO | 63.64% | 77 | 3e-31 | Putative small nuclear ribonucleo protein G OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51390 PE=4 SV=1 |
| A0A1D8PH20_CANAL | 60.27% | 73 | 4e-27 | mRNA splicing protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.836.1 PE=4 SV=1 |
| RUXG_YEAST | 58.44% | 77 | 4e-26 | Small nuclear ribonucleoprotein G OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SMX2 PE=1 SV=1 |
| A0A1E4TKU1_9ASCO | 57.38% | 61 | 4e-23 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_21266 PE=4 SV=1 |
| B5RSM6_YARLI | 29.27% | 82 | 9e-08 | YALI0F30426p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F30426g PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0507
Protein family membership
- Small nuclear ribonucleoprotein G (IPR034098)
Domains and repeats
-
Domain
1
10
20
30
40
50
60
70
77
Detailed signature matches
no IPR
Unintegrated signatures
Residue annotation
-
heptamer interface...
-
Sm1 motif cd01719
-
RNA binding site c...
-
Sm2 motif cd01719
Protein sequence
>MCA_01814_1 MAKVSTPELKKYTDKKVLVQLNGSRKIKGVMRGYDVFLNIVIDEAVEERPDGHVVKVGTAVIRGNSVVSMEALERIA
GO term prediction
Biological Process
GO:0000387 spliceosomal snRNP assembly
Molecular Function
None predicted.
Cellular Component
GO:0005681 spliceosomal complex