Protein

MIA_02371_1

Length
1,229 amino acids

Browser: contig03:617928-621665-

Protein function

EGGNOG:0PHD9SGS1helicase
SGD closest match:S000004802SGS1ATP-dependent helicase SGS1
CGD closest match:CAL0000185821SGS1ATP-dependent DNA helicase

Protein alignments

%idAln lengthE-value
Q5A5R4_CANAL48.565%4537.40e-131ATP-dependent DNA helicase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SGS1 PE=4 SV=1
UniRef50_Q5A5R448.565%4531.80e-127ATP-dependent DNA helicase n=5 Tax=Candida TaxID=1535326 RepID=Q5A5R4_CANAL
SGS1_YEAST42.679%5609.36e-126ATP-dependent helicase SGS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SGS1 PE=1 SV=1
MCA_06405_145.319%4701.85e-125MCA_06405_1
A0A0J9XHM1_GEOCN43.683%4679.87e-124Similar to Saccharomyces cerevisiae YMR190C SGS1 Nucleolar DNA helicase of the RecQ family OS=Geotrichum candidum GN=BN980_GECA15s01264g PE=4 SV=1
Q6BZP6_YARLI44.609%4739.98e-124YALI0F31977p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F31977g PE=4 SV=1
A0A060T609_BLAAD45.254%4535.80e-124ARAD1B15840p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B15840g PE=4 SV=1
A0A1E4TE35_9ASCO48.843%4321.55e-127Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_24928 PE=4 SV=1
A0A167CYR1_9ASCO42.013%4573.86e-118ATP-dependent DNA helicase SGS1 OS=Sugiyamaella lignohabitans GN=SGS1 PE=4 SV=1
A0A1E3PG93_9ASCO42.140%4586.24e-113ATP-dependent DNA helicase OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_27084 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1490

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
  3. Domain
1 200 400 600 800 1000 1229

Detailed signature matches

  1. Family IPR004589
    DNA helicase, ATP-dependent, RecQ type
    1. TIGR00614
  2. Domain IPR014001
    Helicase superfamily 1/2, ATP-binding domain
    1. PS51192 (HELICASE_A...)
    2. SM00487 (ultradead3)
  3. Domain IPR011545
    DEAD/DEAH box helicase domain
    1. PF00270 (DEAD)
  4. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  5. Domain IPR001650
    Helicase, C-terminal
    1. PS51194 (HELICASE_CTER)
    2. SM00490 (helicmild6)
    3. PF00271 (Helicase_C)
  6. Domain IPR032284
    ATP-dependent DNA helicase RecQ, zinc-binding domain
    1. PF16124 (RecQ_Zn_bind)
  7. SITE IPR002464
    DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site
    1. PS00690 (DEAH_ATP_H...)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.40.50...
  3. cd00046 (DEXDc)
  4. cd00079 (HELICc)
  5. mobidb-lite (disord...)

Residue annotation

  1. ATP binding site c...
  2. putative Mg++ bind...
  3. nucleotide binding...
  4. ATP-binding site c...

Protein sequence

>MIA_02371_1
MSRLNDSRDSRSINEDPSSSINKIKDDKAAQAACAFNREAYVTIESLSTDSQDSLSIVDIAPAGAQLLNIPKTDKKDYTS
NTQAPTTFIHSTVTKTPAVISLLSSCDQNNHPIDLTSQESPTQQDNPDPRLGQNLNQAPHRPTTVPVTRTFSPFSCISGF
EVPNNERNYEFRKAPSNCHEPLGSKNAPSTSNTESNLHQKTLDAQLEKPFEKQGSELLHSLKPIHSVDPDMSEETLTEHL
LIKQHESLYQSIRLKNKQKEKEKEKGKEKNTLPIPPGYLYNTGYAEIDEETSARLKSAQRTGTYKNSNTSTGSCAQQKNI
SNNANLYSQRVFSFSPSPPNITPRDIPNASSTPYAVSLNHTTKTTIQELRNHGPDIPVQVLLKEVDSHDDTHIPSILGTK
RPTEVIQTVDKRLKKRFENQSKNNQSLKPLNNRPKVSLPLDSEDSPIDFLQTQYFENVGIPVHHNKNQNNSDITHNREFG
LNISQKHSNKSHVSISSSIVLSSAEDGSKKEDQIDLTVTDENEKRLSPDISKARSLLHQVISFSNNALQYLETDKYLDPT
FCNNLDLLTDSLLTLSREIRQKDNPPKTTHFVNVTQIDDTQIDGSDSILKHAVMRPPTCQSTPIIIEESSPINKPAFCAK
KIFLRRPLSSFSDYEILSGSSSISLSSHRPGICDTVGTQYPWTDEIHSILRFVFKLDKFRENQLNIINSTLKGENVFVLM
PTGGGKSLCYQLPALVKSGVTKGVTFVISPLISLMEDQVQYLQGLGINAEYISGDKFNKKNIIKNLENAEYDLFYLSPEM
IDKSNAIFEIMSNLKENGLLARIVVDEAHCISIWGHDFRKSYQNLKDLSSYFPKIPMMALTATANKKTQQDIAEIFFKSS
VQDCHFHTYSTSFNRPNISYLVEYENGNAKTKNKAIVDIITSKYLGKSGIVYCFSKKDCEELSKDLSNNGIKASFYHADL
HHHQKVNLQKMWQQNEVLVLCATVAFGMGIDKANVRFIIHRTLPLTLDGFYQESGRAGRDGKPADSILMYSRNDFNYLAS
VILSNNKQDNHQKVLSQLLLLKCVSDYCETRSQCLRKFVLQYFNEIFDERLCHKTCINCKNEGTYQNIQLDVTSRCTDLL
SIIEAPPSGKSYQTFFQCVKAYEKLVKTKPADTLDSFMKSVYNEEITEKTLMLLISLNLVTIFIGEAKGTARPIYNCLGK
GSEELPKNESPIILPFDIPTQAFSSLKKK

GO term prediction

Biological Process

GO:0006310 DNA recombination

Molecular Function

GO:0003676 nucleic acid binding
GO:0005524 ATP binding
GO:0008026 ATP-dependent helicase activity

Cellular Component

None predicted.