Protein
MIA_02344_1
Length
548 amino acids
Browser: contig03:520907-522670-
Protein function
| EGGNOG: | 0PGT6 | PGUG_00108 | U4 U6 small nuclear ribonucleoprotein Prp4 |
|---|---|---|---|
| SGD closest match: | S000006382 | PRP4 | U4/U6 small nuclear ribonucleoprotein PRP4 |
| CGD closest match: | CAL0000188618 | CAALFM_CR09480WA | U4/U6-U5 snRNP complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_03932_1 | 54.775% | 555 | 0.0 | MCA_03932_1 |
| A0A0J9XBR4_GEOCN | 49.273% | 550 | 7.45e-168 | Similar to Saccharomyces cerevisiae YPR178W PRP4 Splicing factor, component of the U4/U6-U5 snRNP complex OS=Geotrichum candidum GN=BN980_GECA08s03464g PE=4 SV=1 |
| UniRef50_A0A1E3Q8Z5 | 40.827% | 556 | 4.39e-127 | Uncharacterized protein n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A1E3Q8Z5_LIPST |
| A0A060T2W0_BLAAD | 39.338% | 544 | 1.41e-121 | ARAD1C36036p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C36036g PE=4 SV=1 |
| A0A1E3PJ80_9ASCO | 41.903% | 494 | 5.55e-110 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50788 PE=4 SV=1 |
| A0A167CYV2_9ASCO | 41.202% | 466 | 3.63e-106 | Prp4p OS=Sugiyamaella lignohabitans GN=PRP4 PE=4 SV=1 |
| Q6C4B6_YARLI | 39.798% | 495 | 8.66e-98 | YALI0E28226p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E28226g PE=4 SV=1 |
| PRP4_YEAST | 33.333% | 486 | 7.06e-79 | U4/U6 small nuclear ribonucleoprotein PRP4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PRP4 PE=1 SV=1 |
| A0A1E4TE07_9ASCO | 32.777% | 479 | 2.24e-73 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_99491 PE=4 SV=1 |
| A0A1D8PU02_CANAL | 32.704% | 477 | 3.53e-63 | U4/U6-U5 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CAALFM_CR09480WA PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1125
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Repeat
-
Repeat
1
50
100
150
200
250
300
350
400
450
500
548
Detailed signature matches
no IPR
Unintegrated signatures
-
-
-
-
cd00200 (WD40)
-
mobidb-lite (disord...)
Residue annotation
-
structural tetrad ...
Protein sequence
>MIA_02344_1 MSVHPSRKALLDTEKDLSLKTNQNKQNGTISLSQVPLANNTVSSSKARDYVESQTLRNVAKSFAVPTNDMDVRTRLRMFG EPITLFGEDKADRRERLRAVMLERYQSGRPIGDNIDIEVQSDEEGDENGGEEDDEFYTPGGFELLTTRRDIYLSSTKAAK QRLRYQKLISSFPMSTIIPYRRQIILDLQKIDILGSQFVSERPASMVRFAPTGKHLAVSSWAGEIKIYGVPNLNEIESVG TIQLESDKPSIAWGPSSSSSLLAAGGSDGNIGLYNLTPALSDAANGNINVRQPIAQFKGHEQRIARVAFHPTGKYLGSAS YDMTWRLWDAGTSQELLMQEGHAKEVFTLKFHPDGSLCGTAGLDCVARLWDLRTGRGILSLVGHARPIYGLDISPNGYHV VTGSADGTIKVWDLRQQQQIFDIPAHTNIVSDVKFYSSADAVPRVFSESFPDNAALPEVNEDNVAGLKKYLSESGTYLIS SSYDRTVKIWNADTWTHISTLGGHSDKVMSADVIGCVGPNKQTYIASSGWDRTVKLWTKEDDDEDIDM
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.