Protein
MIA_02325_1
Length
334 amino acids
Browser: contig03:478182-479250+
Protein function
| EGGNOG: | 0PJHJ | TFB3 | RNA polymerase II transcription factor B |
|---|---|---|---|
| SGD closest match: | S000002868 | TFB3 | RNA polymerase II transcription factor B subunit 3 |
| CGD closest match: | CAL0000198995 | TFB3 | TFIIH/NER complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_04153_1 | 58.841% | 328 | 5.84e-125 | MCA_04153_1 |
| A0A167EAS1_9ASCO | 49.080% | 326 | 9.84e-99 | TFIIH/NER complex subunit TFB3 OS=Sugiyamaella lignohabitans GN=TFB3 PE=4 SV=1 |
| UniRef50_A0A167EAS1 | 49.080% | 326 | 2.70e-95 | TFIIH/NER complex subunit TFB3 n=6 Tax=Saccharomycetales TaxID=4892 RepID=A0A167EAS1_9ASCO |
| A0A0J9X6X5_GEOCN | 49.845% | 323 | 1.15e-96 | Similar to Saccharomyces cerevisiae YDR460W TFB3 Subunit of TFIIH and nucleotide excision repair factor 3 complexes OS=Geotrichum candidum GN=BN980_GECA03s03640g PE=4 SV=1 |
| A0A060TDJ4_BLAAD | 45.897% | 329 | 3.56e-89 | ARAD1D07348p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D07348g PE=4 SV=1 |
| TFB3_YEAST | 45.820% | 323 | 1.99e-75 | RNA polymerase II transcription factor B subunit 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFB3 PE=1 SV=1 |
| A0A1E3PGE8_9ASCO | 40.625% | 320 | 1.45e-71 | CDK-activating kinase assembly factor OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47719 PE=4 SV=1 |
| TFB3_YARLI | 40.184% | 326 | 5.26e-65 | RNA polymerase II transcription factor B subunit 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TFB3 PE=3 SV=1 |
| A0A1D8PN00_CANAL | 35.870% | 368 | 1.20e-59 | TFIIH/NER complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TFB3 PE=4 SV=1 |
| A0A1E4TD02_9ASCO | 56.522% | 138 | 1.49e-47 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_4280 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0677
Protein family membership
- Cdk-activating kinase assembly factor MAT1/Tfb3 (IPR004575)
Domains and repeats
-
Domain
-
Domain
1
50
100
150
200
250
300
334
Detailed signature matches
no IPR
Residue annotation
-
Zn binding site cd...
Protein sequence
>MIA_02325_1 MIDSSDDDQCPICKSSKYLSPNLKFLVNPECYHKICENCVDRLFSMGPAQCPYEGCTKILRKNKFKEQIFEDLVVEREVD VRQRVSKTFNKRQEDFQTLEEYNNYLEDVENIIFNLVNNIDVEQTEKRLQAYEQLNKEQILANSRRQRDEDEKLEIRTKY EKERKLKAMQLEIEMFQFEQEIKREAQKEYREEIATSNSDLSTLNAKMEKKIASKIIEKRKLLEAQYVMPPPPSTFRGYM NFDGNGNDSQGGRLGGNGNGVLSPFTPFMGDYEKEPLYVLKEQYFDPDMDSVRSNPKCIGSGYVVEEAYKIDLSRAFFGI GCYVAKEKNLSVKI
GO term prediction
Biological Process
GO:0006289 nucleotide-excision repair
GO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity
Molecular Function
GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity
Cellular Component
GO:0005675 holo TFIIH complex