Protein
MCA_04153_1
Length
331 amino acids
Gene name: TFB3
Description: RNA polymerase II transcription factor B subunit 3
Browser: contigC:2205399-2206485+
RNA-seq: read pairs 942, FPKM 35.1, percentile rank 57.1% (100% = highest expression)
Protein function
| Annotation: | TFB3 | RNA polymerase II transcription factor B subunit 3 | |
|---|---|---|---|
| KEGG: | K10842 | MNAT1 | CDK-activating kinase assembly factor MAT1 |
| EGGNOG: | 0PJHJ | TFB3 | RNA polymerase II transcription factor B |
| SGD closest match: | S000002868 | TFB3 | RNA polymerase II transcription factor B subunit 3 |
| CGD closest match: | CAL0000198995 | TFB3 | TFIIH/NER complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02325_1 | 60.06% | 328 | 2e-141 | MIA_02325_1 |
| A0A167EAS1_9ASCO | 50.00% | 312 | 5e-105 | TFIIH/NER complex subunit TFB3 OS=Sugiyamaella lignohabitans GN=TFB3 PE=4 SV=1 |
| UniRef50_A0A167EAS1 | 50.00% | 312 | 1e-101 | TFIIH/NER complex subunit TFB3 n=6 Tax=Saccharomycetales TaxID=4892 RepID=A0A167EAS1_9ASCO |
| A0A0J9X6X5_GEOCN | 49.23% | 325 | 2e-104 | Similar to Saccharomyces cerevisiae YDR460W TFB3 Subunit of TFIIH and nucleotide excision repair factor 3 complexes OS=Geotrichum candidum GN=BN980_GECA03s03640g PE=4 SV=1 |
| A0A060TDJ4_BLAAD | 46.30% | 324 | 3e-91 | ARAD1D07348p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D07348g PE=4 SV=1 |
| A0A1E3PGE8_9ASCO | 40.81% | 321 | 2e-81 | CDK-activating kinase assembly factor OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_47719 PE=4 SV=1 |
| TFB3_YEAST | 42.15% | 325 | 4e-75 | RNA polymerase II transcription factor B subunit 3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFB3 PE=1 SV=1 |
| TFB3_YARLI | 38.41% | 315 | 6e-74 | RNA polymerase II transcription factor B subunit 3 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=TFB3 PE=3 SV=1 |
| A0A1D8PN00_CANAL | 37.46% | 347 | 6e-69 | TFIIH/NER complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=TFB3 PE=4 SV=1 |
| A0A1E4TD02_9ASCO | 59.20% | 125 | 2e-49 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_4280 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0177
Protein family membership
- Cdk-activating kinase assembly factor MAT1/Tfb3 (IPR004575)
Domains and repeats
-
Domain
-
Domain
1
50
100
150
200
250
300
331
Detailed signature matches
no IPR
Protein sequence
>MCA_04153_1 MAILENDYIDNDECPSCKSSRYLKPNLRILVNPVCYHRLCEDCVNRIFATGPAPCPYEGCGKILRKNKFKEPNFEDLVVE KEVDVRQRVSKTFNKRREDFATLKEYNDYLEEVEDIIYKLSNDIDVEENQAKLQEYEQKNRSAILENSRRQQFDEEQQEL RNKYEKERRSKALQLEREMELAEREIRQQAEQDYVKELSTSNANPLTVRAKIQQETLRKIAEKRRQLENQLLMPPPPISG LFRGLHGDGNGNDKKVQTPFTPFMGDYEKEPLYIPRDDYYDPLMDKIRNNPLCQAAGYIVEDAYKLDLSQAFFGIGVYIE KEKASKTISAA
GO term prediction
Biological Process
GO:0006289 nucleotide-excision repair
GO:0045737 positive regulation of cyclin-dependent protein serine/threonine kinase activity
Molecular Function
GO:0061575 cyclin-dependent protein serine/threonine kinase activator activity
Cellular Component
GO:0005675 holo TFIIH complex