Protein
MIA_02181_1
Length
318 amino acids
Browser: contig03:64991-66113-
Protein function
| EGGNOG: | 0PIMC | SKI8 | meiotic recombination protein |
|---|---|---|---|
| SGD closest match: | S000003181 | SKI8 | Antiviral protein SKI8 |
| CGD closest match: | CAL0000201104 | SKI8 | SKI complex subunit WD repeat protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_06458_2 | 62.058% | 311 | 5.30e-131 | MCA_06458_2 |
| A0A0J9XGN5_GEOCN | 57.692% | 312 | 7.31e-115 | Similar to Saccharomyces cerevisiae YGL213C SKI8 Ski complex component and WD-repeat protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome OS=Geotrichum candidum GN=BN980_GECA13s02573g PE=4 SV=1 |
| UniRef50_A0A0J9XGN5 | 57.692% | 312 | 1.50e-111 | Similar to Saccharomyces cerevisiae YGL213C SKI8 Ski complex component and WD-repeat protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9XGN5_GEOCN |
| A0A1E3PQX4_9ASCO | 44.904% | 314 | 5.14e-89 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_54089 PE=4 SV=1 |
| A0A060T5Z4_BLAAD | 43.269% | 312 | 6.61e-79 | ARAD1C09636p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C09636g PE=4 SV=1 |
| Q6CBB4_YARLI | 42.357% | 314 | 1.76e-73 | YALI0C20339p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C20339g PE=4 SV=1 |
| A0A167EF90_9ASCO | 41.497% | 294 | 2.16e-65 | SKI complex subunit WD repeat protein SKI8 OS=Sugiyamaella lignohabitans GN=SKI8 PE=4 SV=1 |
| A0A1E4TK79_9ASCO | 33.230% | 322 | 6.70e-41 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30407 PE=4 SV=1 |
| SKI8_YEAST | 28.267% | 329 | 6.85e-27 | Antiviral protein SKI8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKI8 PE=1 SV=1 |
| Q5A8I4_CANAL | 28.972% | 321 | 5.24e-22 | SKI complex subunit WD repeat protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SKI8 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0940
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Repeat
1
50
100
150
200
250
318
Detailed signature matches
no IPR
Unintegrated signatures
-
cd00200 (WD40)
Residue annotation
-
structural tetrad ...
Protein sequence
>MIA_02181_1 MVSIFQIYIASNSVSDAHKSDIFSVVVTESFTATASGDGKVSLWDNSKDEPESITALQSPVGYHHIASNGRNTLAAVSYD GRVSFFDLNDMVKIEVPAFEKEESKYWALALSVEQDLLVLSTIDGAVDLWDISELTHPKKITTLRDLKKGFGLSVDISPD GKYIATGHETGTLLIYQVETLKFFLSIPGHSSPIRSVKFSPSSTMIAVAGDSKLISLYNVLTGEHVTNLSGHDGWIFSLS WSEIGDFLLSSCYGGKAKIWSLETMTCVFTISENSKPLLSSAWLDKGWGKGVIGGKNKGVVTVGEEKIIRWYREGSGQ
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.