Protein
MCA_06458_2
Length
315 amino acids
Gene name: SKI8
Description: Antiviral protein SKI8
Browser: contigD:4304749-4306026-
RNA-seq: read pairs 1392, FPKM 54.4, percentile rank 67.1% (100% = highest expression)
Protein function
| Annotation: | SKI8 | Antiviral protein SKI8 | |
|---|---|---|---|
| KEGG: | K12601 | SKI8 | superkiller protein 8 |
| EGGNOG: | 0PIMC | SKI8 | meiotic recombination protein |
| SGD closest match: | S000003181 | SKI8 | Antiviral protein SKI8 |
| CGD closest match: | CAL0000201104 | SKI8 | SKI complex subunit WD repeat protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_02181_1 | 62.06% | 311 | 6e-129 | MIA_02181_1 |
| A0A0J9XGN5_GEOCN | 56.05% | 314 | 2e-111 | Similar to Saccharomyces cerevisiae YGL213C SKI8 Ski complex component and WD-repeat protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome OS=Geotrichum candidum GN=BN980_GECA13s02573g PE=4 SV=1 |
| UniRef50_A0A0J9XGN5 | 56.05% | 314 | 4e-108 | Similar to Saccharomyces cerevisiae YGL213C SKI8 Ski complex component and WD-repeat protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9XGN5_GEOCN |
| A0A1E3PQX4_9ASCO | 48.42% | 316 | 4e-92 | WD40 repeat-like protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_54089 PE=4 SV=1 |
| A0A060T5Z4_BLAAD | 46.35% | 315 | 2e-80 | ARAD1C09636p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C09636g PE=4 SV=1 |
| Q6CBB4_YARLI | 44.94% | 316 | 4e-78 | YALI0C20339p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_C20339g PE=4 SV=1 |
| A0A167EF90_9ASCO | 42.23% | 296 | 1e-59 | SKI complex subunit WD repeat protein SKI8 OS=Sugiyamaella lignohabitans GN=SKI8 PE=4 SV=1 |
| A0A1E4TK79_9ASCO | 31.72% | 309 | 3e-38 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_30407 PE=4 SV=1 |
| SKI8_YEAST | 27.89% | 398 | 2e-28 | Antiviral protein SKI8 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKI8 PE=1 SV=1 |
| Q5A8I4_CANAL | 27.72% | 386 | 5e-20 | SKI complex subunit WD repeat protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SKI8 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2992
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
-
Repeat
1
50
100
150
200
250
315
Detailed signature matches
Protein sequence
>MCA_06458_2 MSHAYVATKSIENAHASDIFSVCATEKYTITASGDGKVLAWDNFSNTPEPVPICSSPLGFHHVATNGSNILAAVGYDGRI SIVDLTTLKPVEIPAFEKQSSKYWAVALSSEKPLLAVTTINGTVDLWNLENITEPILQGSLESSKKGFGLTVDISSDGSL VATGNESGALLIFKTEGNRLIFSIPGHSQPIRSVKFSPTGNLLAVAGDSKLISIYTTNTGEHFANLLGHEGWIFSLAWSE TGEFLLSCSYDGKAKIWSLENLSCVYNILENNKPLLSGAWLNKGWGVGVIGGKNKGVVLVGEEKAVRWYREAAGQ
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0005515 protein binding
Cellular Component
None predicted.