MIA_02071_1

Protein

Length

1,926 amino acids

Browser: contig02:2514318-2520152-

Protein function

EGGNOG:	0QEEB	SNF2	BROMO
SGD closest match:	S000005816	SNF2	Transcription regulatory protein SNF2
CGD closest match:	CAL0000176922	SNF2	SWI/SNF catalytic subunit

Protein alignments

	%id	Aln length
MCA_00910_1	79.112%	991	MCA_00910_1
A0A0J9X6E8_GEOCN	73.894%	904	Similar to Saccharomyces cerevisiae YOR290C SNF2 Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation OS=Geotrichum candidum GN=BN980_GECA04s03024g PE=4 SV=1
A0A167CPD8_9ASCO	64.007%	1153	SWI/SNF catalytic subunit SNF2 OS=Sugiyamaella lignohabitans GN=SNF2 PE=4 SV=1
UniRef50_A0A0J9XG31	70.984%	996	Similar to Saccharomyces cerevisiae YOR290C SNF2 Catalytic subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation n=4 Tax=Saccharomycetales TaxID=4892 RepID=A0A0J9XG31_GEOCN
A0A060TIA1_BLAAD	68.877%	935	ARAD1D44968p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D44968g PE=4 SV=1
Q6C828_YARLI	65.864%	914	YALI0D23287p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D23287g PE=4 SV=1
A0A1E3PMW1_9ASCO	67.107%	909	Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_33521 PE=4 SV=1
A0A1E4TJU7_9ASCO	63.472%	939	Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_22566 PE=4 SV=1
A0A1D8PGK4_CANAL	61.521%	907	SWI/SNF catalytic subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SNF2 PE=4 SV=1
SNF2_YEAST	59.670%	910	Transcription regulatory protein SNF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNF2 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0355

Protein family membership

None predicted.

Domains and repeats

Domain
252 - 735
Leucine-rich repeat domain, L domain-like (IPR032675)
952 - 1,144
Helicase superfamily 1/2, ATP-binding domain (IPR014001)
1,275 - 1,439
Helicase, C-terminal (IPR001650)
Domain
357 - 393
Glutamine-Leucine-Glutamine, QLQ (IPR014978)
779 - 855
Helicase/SANT-associated domain (IPR014012)
910 - 1,183
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
1,185 - 1,484
P-loop containing nucleoside triphosphate hydrolase (IPR027417)
1,486 - 1,555
Snf2, ATP coupling domain (IPR029295)
1,686 - 1,816
Bromodomain (IPR001487)
Domain
968 - 1,251
SNF2-related, N-terminal domain (IPR000330)

1 200 400 600 800 1000 1200 1400 1600 1800 1926

Detailed signature matches

IPR032675

Leucine-rich repeat domain, L domain-like
1. G3DSA:3.80.10.10
  
  252 - 735
  
  GENE3D
  G3DSA:3.80.10.10 (G3DSA:3.80.10.10)
IPR014978

Glutamine-Leucine-Glutamine, QLQ
1. PS51666 (QLQ)
  
  358 - 393
  
  PROSITE profiles
  PS51666 (QLQ)
2. SM00951 (QLQ_2)
  
  357 - 393
  
  SMART
  SM00951 (QLQ_2)
IPR014012

Helicase/SANT-associated domain
1. PS51204 (HSA)
  
  779 - 855
  
  PROSITE profiles
  PS51204 (HSA)
2. PF07529 (HSA)
  
  784 - 854
  
  Pfam
  PF07529 (HSA)
IPR027417

P-loop containing nucleoside triphosphate hydrolase
1. SSF52540 (P-loop co...)
  
  910 - 1,183
  
  SUPERFAMILY
  SSF52540 (P-loop containing nucleoside triphosphate hydrolases)
  
  1,185 - 1,484
  
  SUPERFAMILY
  SSF52540 (P-loop containing nucleoside triphosphate hydrolases)
IPR014001

Helicase superfamily 1/2, ATP-binding domain
1. PS51192 (HELICASE_A...)
  
  968 - 1,133
  
  PROSITE profiles
  PS51192 (HELICASE_ATP_BIND_1)
2. SM00487 (ultradead3)
  
  952 - 1,144
  
  SMART
  SM00487 (ultradead3)
IPR000330

SNF2-related, N-terminal domain
1. PF00176 (SNF2_N)
  
  968 - 1,251
  
  Pfam
  PF00176 (SNF2_N)
IPR001650

Helicase, C-terminal
1. PS51194 (HELICASE_CTER)
  
  1,278 - 1,439
  
  PROSITE profiles
  PS51194 (HELICASE_CTER)
2. SM00490 (helicmild6)
  
  1,304 - 1,388
  
  SMART
  SM00490 (helicmild6)
3. PF00271 (Helicase_C)
  
  1,275 - 1,388
  
  Pfam
  PF00271 (Helicase_C)
IPR029295

Snf2, ATP coupling domain
1. PF14619 (SnAC)
  
  1,501 - 1,555
  
  Pfam
  PF14619 (SnAC)
2. SM01314 (SnAC_2)
  
  1,486 - 1,555
  
  SMART
  SM01314 (SnAC_2)
IPR001487

Bromodomain
1. PR00503 (BROMODOMAIN)
  
  1,775 - 1,794
  
  PRINTS
  PR00503 (BROMODOMAIN)
  
  1,757 - 1,775
  
  PRINTS
  PR00503 (BROMODOMAIN)
  
  1,741 - 1,757
  
  PRINTS
  PR00503 (BROMODOMAIN)
2. SM00297 (bromo_6)
  
  1,703 - 1,813
  
  SMART
  SM00297 (bromo_6)
3. SSF47370 (Bromodomain)
  
  1,686 - 1,813
  
  SUPERFAMILY
  SSF47370 (Bromodomain)
4. PS50014 (BROMODOMAIN_2)
  
  1,724 - 1,794
  
  PROSITE profiles
  PS50014 (BROMODOMAIN_2)
5. G3DSA:1.20.92...
  
  1,700 - 1,816
  
  GENE3D
  G3DSA:1.20.920.10 (G3DSA:1.20.920.10)
6. PF00439 (Bromodomain)
  
  1,727 - 1,798
  
  Pfam
  PF00439 (Bromodomain)

no IPR

Unintegrated signatures

Coil

1,783 - 1,803

COILS
Coil (Coil)

194 - 214

COILS
Coil (Coil)

274 - 309

COILS
Coil (Coil)

884 - 904

COILS
Coil (Coil)

836 - 856

COILS
Coil (Coil)

1,571 - 1,591

COILS
Coil (Coil)
G3DSA:3.40.50...

921 - 1,182

GENE3D
G3DSA:3.40.50.10810 (G3DSA:3.40.50.10810)
G3DSA:3.40.50...

1,261 - 1,426

GENE3D
G3DSA:3.40.50.300 (G3DSA:3.40.50.300)
cd00046 (DEXDc)

976 - 1,115

CDD
cd00046 (DEXDc)
cd00079 (HELICc)

1,268 - 1,396

CDD
cd00079 (HELICc)
mobidb-lite (disord...)

1,879 - 1,926

MobiDB Lite
mobidb-lite (disorder_prediction)

1 - 156

MobiDB Lite
mobidb-lite (disorder_prediction)

411 - 637

MobiDB Lite
mobidb-lite (disorder_prediction)

1,559 - 1,645

MobiDB Lite
mobidb-lite (disorder_prediction)

205 - 270

MobiDB Lite
mobidb-lite (disorder_prediction)

894 - 926

MobiDB Lite
mobidb-lite (disorder_prediction)

307 - 353

MobiDB Lite
mobidb-lite (disorder_prediction)

Residue annotation

ATP binding site c...

984G

ATP binding site
984G, 985L, 986G, 987K, 988T
CDD
cd00046 (DEXDc)

985L

ATP binding site
984G, 985L, 986G, 987K, 988T
CDD
cd00046 (DEXDc)

986G

ATP binding site
984G, 985L, 986G, 987K, 988T
CDD
cd00046 (DEXDc)

987K

ATP binding site
984G, 985L, 986G, 987K, 988T
CDD
cd00046 (DEXDc)

988T

ATP binding site
984G, 985L, 986G, 987K, 988T
CDD
cd00046 (DEXDc)
putative Mg++ bind...

1,083D

putative Mg++ binding site
1,083D, 1,084E, 1,085G, 1,086H
CDD
cd00046 (DEXDc)

1,084E

putative Mg++ binding site
1,083D, 1,084E, 1,085G, 1,086H
CDD
cd00046 (DEXDc)

1,085G

putative Mg++ binding site
1,083D, 1,084E, 1,085G, 1,086H
CDD
cd00046 (DEXDc)

1,086H

putative Mg++ binding site
1,083D, 1,084E, 1,085G, 1,086H
CDD
cd00046 (DEXDc)
nucleotide binding...

1,298Q

nucleotide binding region
1,298Q, 1,299M, 1,300T, 1,301Q, 1,321D, 1,322G, 1,350T, 1,351R, 1,352A
CDD
cd00079 (HELICc)

1,299M

nucleotide binding region
1,298Q, 1,299M, 1,300T, 1,301Q, 1,321D, 1,322G, 1,350T, 1,351R, 1,352A
CDD
cd00079 (HELICc)

1,300T

nucleotide binding region
1,298Q, 1,299M, 1,300T, 1,301Q, 1,321D, 1,322G, 1,350T, 1,351R, 1,352A
CDD
cd00079 (HELICc)

1,301Q

nucleotide binding region
1,298Q, 1,299M, 1,300T, 1,301Q, 1,321D, 1,322G, 1,350T, 1,351R, 1,352A
CDD
cd00079 (HELICc)

1,321D

nucleotide binding region
1,298Q, 1,299M, 1,300T, 1,301Q, 1,321D, 1,322G, 1,350T, 1,351R, 1,352A
CDD
cd00079 (HELICc)

1,322G

nucleotide binding region
1,298Q, 1,299M, 1,300T, 1,301Q, 1,321D, 1,322G, 1,350T, 1,351R, 1,352A
CDD
cd00079 (HELICc)

1,350T

nucleotide binding region
1,298Q, 1,299M, 1,300T, 1,301Q, 1,321D, 1,322G, 1,350T, 1,351R, 1,352A
CDD
cd00079 (HELICc)

1,351R

nucleotide binding region
1,298Q, 1,299M, 1,300T, 1,301Q, 1,321D, 1,322G, 1,350T, 1,351R, 1,352A
CDD
cd00079 (HELICc)

1,352A

nucleotide binding region
1,298Q, 1,299M, 1,300T, 1,301Q, 1,321D, 1,322G, 1,350T, 1,351R, 1,352A
CDD
cd00079 (HELICc)
ATP-binding site c...

1,358N

ATP-binding site
1,358N, 1,379Q, 1,383R, 1,386R
CDD
cd00079 (HELICc)

1,379Q

ATP-binding site
1,358N, 1,379Q, 1,383R, 1,386R
CDD
cd00079 (HELICc)

1,383R

ATP-binding site
1,358N, 1,379Q, 1,383R, 1,386R
CDD
cd00079 (HELICc)

1,386R

ATP-binding site
1,358N, 1,379Q, 1,383R, 1,386R
CDD
cd00079 (HELICc)

Protein sequence

>MIA_02071_1
MDQQQHPSFSPSISFSAGGTFQNFSLNPPPPPSAQSAAQPGQFHSYQLQQQPQSVPQHLQQSIQIQQHHQQQLHQQQQPQ
QLHHHQQQQPQLNSSQNSPMHSSSNTAANTPAASMPSPSVQASPLVQNSPFLQAPSSASPQFQQQQQQQGIQNIFPIRSR
EDIKRCLNRWRQLQQELGPEVYNNPEFMSLTKILNDVQRAQMRVQQNLQQQQQQQQQQDQLMTNNRGSQMSSSQQRPPSH
SPQLSNSFVVPQQQQPPQQPHQQQQQQQQQPQQLQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHLHNQQQSHQQ
QSQDAHSPFSQNTPQLQKATASTPQQSGPAAVSAPPSIFTIEQQNLLKSQFKAFKSLFRNRSIPQALQEQLFNPTVAAAF
QVAPFPQFSQNNTPVIPPANLPQDQFSSSSPISTNQHQQKLYQQQQPFQPNRIPSNGIPISQPTISRVPSTAPPDSPSTL
QRTITTPTSQINSPHMRRKSGTPSSPAPPRPISATPSAPTPMAPPSFSPGLAHPQPVIPQRSNQQSPQQMSQPVPASNGP
PATAQTPSPVPLSVSTPGSIPGPGAGPSPIPGNGPSQTKQIIPQASPNTQQVTSPAAKPLPTPAPKPPSSPKTNLEKLGV
CDSIDPYSYIDKPIDISDIPPISEKAPFIPALMPLGVNVEDMHRLREQDINTQIFNRLVDLYPVNEISLDKIDNLTDDQI
DKLIEFKSLSLLNKQKALRGDILADLYYFNSVAMNESNQIHFTRMKQQSLVEAVKTEQFDAQQRTERTQRENQLKLNHLK
TICSRSKETHVHLINSEEKHRKFGRGVSSFHSFTEKEEQKRAERTARQRLQALKANDEEAYIKLLDQTKDTRITHLLKQT
NSFLDSLAQAVKNQQRETRSIETDANEDEPPEEEEDHSQDDDDWEEGEEKVDYYAVAHRIKEVVTKQPSILVGGTLKEYQ
LKGLQWMISLYNNNLNGILADEMGLGKTIQTISLITYLIEVKHVPGPYLVIVPLSTLTNWTMEFERWAPSVKKVVYKGPP
VARKAQQAIVRSGDFQVVLTTYEYIIKDRPILSRIKWVHMIIDEGHRMKNAQSKLSYTLTTYYSTKYRLILTGTPLQNNL
PELWALLNFVLPKIFNSVKSFDEWFNTPFANTGSQDKMDLSEEETLLIIRRLHKVLRPFLLRRLKKDVEKDLPDKVEKVI
KCKMSALQSSLYQQVLRFKKVFVADENKSHGAKGLNNKLMQLKKICNHPFVFEQVENMINPTTMSNALLWRTAGKFELLD
RVLPKFKATNHRVLIFFQMTQIMDIMEDFLLMLGYKYLRLDGGTKADERSELLKKFNAPNSPYFAFLLSTRAGGLGLNLQ
TADTVIIFDTDWNPHQDLQAQDRAHRIGQTKEVRILRLITENSVEETILDRAHRKLEIDGKVIQAGKFDNKSTNEEQEAF
LRRLLEQEELKRLHKNDEEEDLDDDELNEILARDDNEREIFRKIDEDRIAKCPFGKGKEFDRLFGESELPEVYTEEFFAK
EAMEPEPNTQENYGRGARERKVLHYDDGLTEEQWVEAIDAEDDTPEEATARKRARIEKRRINKMRREHEKTTDGGSPRTR
SPSVIDTPSPDVLPFSSSRVATPSSSTPVTPAVAVTGKRKRGRRSRAEIEAAAAMPVTLLNSPSIPVTAATIADAALPAM
PPQRRKGKGRPPKIKETLGPIERMDLTNKMRILYEHVYNLVDEHGRPRIYLFKELPSKRQYATYYAIIENPIAMDIINKR
INNNTYQRLGEFRADFQLMFDNARKYNEEGSQVYEDANEMEREFNGKLNELVPGSVVPKTQPAAEAKILTSAQVFGTPMV
NGGGTTNGTLTNETAMHAGMEQSNGHLNGTNTGLMEQQNFARSGSDGGSSGKESTSNPTLSSGQTKDDDGDDDDYHGNFS
EDDDDD

GO term prediction

Biological Process

GO:0006355 regulation of transcription, DNA-templated

Molecular Function

GO:0005515 protein binding
GO:0005524 ATP binding
GO:0042393 histone binding

Cellular Component

GO:0005634 nucleus

Filter view on

Entry type

Status

Per-residue features