Protein
MIA_01902_1
Length
881 amino acids
Browser: contig02:2023950-2026772-
Protein function
| EGGNOG: | 0PI3S | PGUG_03382 | RPR |
|---|---|---|---|
| SGD closest match: | S000005195 | NRD1 | Protein NRD1 |
| CGD closest match: | CAL0000196731 | orf19.581 | Nrd1 complex RNA-binding subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_00963_1 | 75.248% | 202 | 2.89e-88 | MCA_00963_1 |
| A0A0J9X800_GEOCN | 74.317% | 183 | 1.32e-80 | Similar to Saccharomyces cerevisiae YNL251C NRD1 RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p) OS=Geotrichum candidum GN=BN980_GECA05s04025g PE=4 SV=1 |
| UniRef50_A0A0J9X800 | 74.317% | 183 | 2.69e-77 | Similar to Saccharomyces cerevisiae YNL251C NRD1 RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X800_GEOCN |
| A0A1E3PNF2_9ASCO | 56.771% | 192 | 3.54e-63 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50762 PE=4 SV=1 |
| A0A1D8PN05_CANAL | 57.447% | 188 | 1.48e-63 | Nrd1 complex RNA-binding subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.581 PE=4 SV=1 |
| Q6C4P1_YARLI | 58.989% | 178 | 4.32e-63 | YALI0E24849p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E24849g PE=4 SV=1 |
| A0A1E4THB7_9ASCO | 61.364% | 176 | 1.69e-60 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2870 PE=4 SV=1 |
| A0A060TCT5_BLAAD | 56.757% | 185 | 2.32e-58 | ARAD1D02156p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D02156g PE=4 SV=1 |
| NRD1_YEAST | 56.742% | 178 | 1.92e-57 | Protein NRD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NRD1 PE=1 SV=1 |
| A0A167E0P1_9ASCO | 46.199% | 171 | 3.89e-43 | Nrd1 complex RNA-binding subunit OS=Sugiyamaella lignohabitans GN=NRD1 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0508
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
800
881
Detailed signature matches
-
-
SSF48464 (ENTH/VHS ...)
-
-
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MIA_01902_1 MSETSAPVADPFTEFTNILDALLSVKPPGVSGSKIRSLTSLAVSNVKLEKSMIDALYNHLIKTPYSHKLGILYVVDAIAR GYQDLAVNETYSTQSEAPEGTYTAAVYRISQLVENMFVNIFGIPPAEDIKDKMKKVIDIWERCETFPQETLDTIKRKWFN VIDNSTTPPSSPPSHIVEAVRKLTEEHKAQKQDEEPNQELLSPSLRAQETSATSEAPSEISSEAPAVASAPVSDAAFIAK FLEKIKQDSKPTTEDDGTSSSSDNTLDSKTEGGEPSANILVSDDSNSASSTATAALQSDLITQLLKQNQQGSTTVADASS APSTNAEQSWNEQTEQNEHQEEDSGSDDKRGFDRRRRSRSPDGRGNSKRARNNSPKRGKQLDIKPDHEITRERNVTRDPT IPDGSIKVLSRTLFIGGVTSDTTEESLVQIFKPFAEVQSMVFHKEMRHAFVKLYSRAEAEISRERLEEENKSGRLGLRAR WGVGFGPRECCDYQTGISIIPLSKLTEADRRWIVEAEFGGTGGAPLDTGLCIEEPDIEIGAGVSSKAISQRMPSNSSRNG PKSSRGERLDRPEPTFNGGAPSGSNSGSSGGSSHGRRRDGGRHDRRSGRDRDRGRNGGGSGSGNRNGGRYGNGDRNGGGG GGFRDQRGGGRQSNNGGGNFNGGMPNFGGPVGMPNMGMPGMNMPGAGGFNLPANLATLISSLNPQGMAPGGAPMQQPPQN NHNQRYDRGRGGNRHNNNNNNGGNNNNGNNNNPQQLLAQLTQQLSAAAAAQQFGMGGGAPMGGPPPYGGAPPQSYGAPGV SSNLSAALFQLQQAGNQGGRNGNGAPPPPGLGGSPMGGPMGAPMGNGGQLPFNMTQQMATALLQQHHQQQQHHHHQNQRR N
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.