Protein
MCA_00963_1
Length
802 amino acids
Gene name: NRD1
Description: Protein NRD1
Browser: contigA:3052652-3055256+
RNA-seq: read pairs 2098, FPKM 32.3, percentile rank 54.7% (100% = highest expression)
Protein function
| Annotation: | NRD1 | Protein NRD1 | |
|---|---|---|---|
| KEGG: | K15560 | NRD1 | protein NRD1 |
| EGGNOG: | 0QEBN | FG01424.1 | RNA binding protein Nrd1 |
| SGD closest match: | S000005195 | NRD1 | Protein NRD1 |
| CGD closest match: | CAL0000196731 | orf19.581 | Nrd1 complex RNA-binding subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X800_GEOCN | 47.74% | 553 | 5e-154 | Similar to Saccharomyces cerevisiae YNL251C NRD1 RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p) OS=Geotrichum candidum GN=BN980_GECA05s04025g PE=4 SV=1 |
| UniRef50_A0A0J9X800 | 47.74% | 553 | 1e-150 | Similar to Saccharomyces cerevisiae YNL251C NRD1 RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p) n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X800_GEOCN |
| A0A1E4THB7_9ASCO | 39.46% | 560 | 4e-103 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2870 PE=4 SV=1 |
| MIA_01902_1 | 74.51% | 204 | 7e-97 | MIA_01902_1 |
| A0A1E3PKZ2_9ASCO | 37.99% | 558 | 1e-98 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51379 PE=4 SV=1 |
| A0A1D8PN05_CANAL | 64.00% | 175 | 6e-72 | Nrd1 complex RNA-binding subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.581 PE=4 SV=1 |
| Q6C4P1_YARLI | 56.12% | 196 | 2e-69 | YALI0E24849p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E24849g PE=4 SV=1 |
| NRD1_YEAST | 60.34% | 179 | 5e-69 | Protein NRD1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NRD1 PE=1 SV=1 |
| A0A060TCT5_BLAAD | 59.34% | 182 | 3e-66 | ARAD1D02156p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D02156g PE=4 SV=1 |
| A0A167E0P1_9ASCO | 47.46% | 177 | 2e-50 | Nrd1 complex RNA-binding subunit OS=Sugiyamaella lignohabitans GN=NRD1 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0477
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
100
200
300
400
500
600
700
802
Detailed signature matches
-
-
SSF48464 (ENTH/VHS ...)
-
-
no IPR
Unintegrated signatures
-
-
-
mobidb-lite (disord...)
Protein sequence
>MCA_00963_1 MSEVPQEDNNISASPIEEFSATLEALSLIKPPGVSGSKIRKLQELAVANVESERVLVDKLYDHLLKTPHSHKLGVLYAVD AIVRDYKDQAQAQSQEVGPDAPAGTFAAGVYHISELIVKMFENIFEEPVSDSIKDKIYKVIDIWKYAQTFTPEILSTIEK NWFNDFNPDTVNQTEQSATPVETSKSPEKDTESKPEQPNSETENTKVPDAATVAAAPVPDTNAILQVLAKIAKQEPENKS KSTEPPASETGSAEPKQEEIKQESSEPKPAETSTESLLAHLAAVTPAQTGLINQLLQQNQQQQGATASVTGQPWNMTSSN VEGAGDSPTQGIDRRRRSRSPDSSDNRDGQSNKRARPNDSPGSQDTQEEHISRPRNLSKDPTIPDGSIKVLSRTLFIGGV PPQMTESELINIFRPFGKVQTIILHKEKKHAFVKVYSRAEAESAREKFEEANKSGQIGLRARWGVGFGPRECCDYQTGIS IIPLTRLTEADKRWIVEAEYGGTGGEPLVSGMCMEEPDIEIGAGVSSKAISQRMPSNSSRNGPKSSRGERSEGGKDRFDH HRRGGFNDRRDRHDDRRNGGRFNRNNDRDNRRNGNRHGPNNRFQNNHRDYRGGMNYNNNNNMNMNMMGGGMGMPGVPPAG FGGALPQNLVSLLSTLTQQQQQQQQQQKPPMHNNGYRNRNNHHNQHQGAGGMLPYGGAGGSQGGAPGNPALPNQLSQQLQ QLAAATAAQNFQQQMQQGNHAGGMNNNNQLQALFQLQQQQQQQQQQPLPQLPLNITPQIAAALLQQQQNQQQQQNQQNQR QR
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.