Protein

MIA_01871_1

Length
613 amino acids

Browser: contig02:1937719-1939680-

Protein function

EGGNOG:0PK9ECLP1Required for endonucleolytic cleavage during polyadenylation-dependent pre-mRNA 3'-end formation (By similarity)
SGD closest match:S000005776CLP1mRNA cleavage and polyadenylation factor CLP1
CGD closest match:CAL0000199618CLP1mRNA cleavage and polyadenylation factor CLP1

Protein alignments

%idAln lengthE-value
MCA_01292_147.200%5008.02e-139MCA_01292_1
A0A060T9K1_BLAAD35.404%4831.10e-86mRNA cleavage and polyadenylation factor CLP1 OS=Blastobotrys adeninivorans GN=CLP1 PE=3 SV=1
A0A167CWD1_9ASCO37.619%4201.22e-84Clp1p OS=Sugiyamaella lignohabitans GN=CLP1 PE=4 SV=1
UniRef50_A0A167CWD137.619%4203.36e-81Clp1p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167CWD1_9ASCO
A0A1E3PP20_9ASCO35.622%4662.40e-79mRNA cleavage and polyadenylation factor CLP1 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=CLP1 PE=3 SV=1
A0A0J9XFP0_GEOCN39.640%2225.40e-47mRNA cleavage and polyadenylation factor CLP1 OS=Geotrichum candidum GN=CLP1 PE=3 SV=1
CLP1_YARLI35.294%2217.01e-33mRNA cleavage and polyadenylation factor CLP1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=CLP1 PE=3 SV=1
CLP1_YEAST34.783%2306.10e-31mRNA cleavage and polyadenylation factor CLP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CLP1 PE=1 SV=1
CLP1_CANAL34.615%2083.13e-29mRNA cleavage and polyadenylation factor CLP1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CLP1 PE=3 SV=1
A0A1E4TI75_9ASCO32.735%2239.46e-22Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_19614 PE=3 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0594
Predicted cleavage: 16

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 613

Detailed signature matches

  1. Domain IPR032324
    Clp1, N-terminal beta-sandwich domain
    1. PF16573 (CLP1_N)
  2. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  3. Domain IPR032319
    Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain
    1. PF16575 (CLP1_P)
  4. Domain IPR010655
    Pre-mRNA cleavage complex subunit Clp1
    1. PF06807 (Clp1)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.40.50...
  2. mobidb-lite (disord...)

Protein sequence

>MIA_01871_1
MNGGSRFLSDLLKGTAELFGTEISQGPEYTFSNYKGAIYTWHGCTFEYKNISKNGLGMQTLGLASIRSTGASAASYKPIP
GGSATGSLGAGVSNISDFLPGGGLEGSTVDDDQTDDKPSDSNQNANSSTNSNGIPQTPSSIPPVNTTNTTVISEHISEKS
QMTIYANLHFAFENIRQNEAAALSSSSSPPPPSTNGCPRVLLLGPRDTGKTSLCKTLVSYDCKRGRTPLLVNLDPVESVF
CAPGALSATVLADILEVEQGWGGSAITGPALFHPKQPLVRFFGLDNPMKNAAYYAESIALLAKDVRARLDQDSIAAATGI
YVDTPAELVAPQNKDLARNIVARIIAEFAINVVLVVGADGSDLVKEIKKIVEPPTTSQQPPSSEPPSATEDPDSSKTTSP
DTKSAAPSSSPSSLISPQITHKVTVVSAPKSGGAVARAPEFLVSAQSQLINEYFYGTPKQPLSPYTITVDYSMLHIFRIA
EDKLSDSGEVLPSNPAADGDAAATDKIVEDDDDDYYEPLEDGVGATAASGAPAPKKPKYLIKLEPSSIVENGLLAVVDAG
VDDSIDVIAKAAVRCFVHVVEADDNRRKMRILMPIHGRLPNKPFILGDFRYTE

GO term prediction

Biological Process

GO:0031124 mRNA 3'-end processing

Molecular Function

None predicted.

Cellular Component

None predicted.