Protein
MIA_01820_1
Length
657 amino acids
Browser: contig02:1775600-1777647-
Protein function
| EGGNOG: | 0PFVG | BBP | Necessary for the splicing of pre-mRNA. Has a role in the recognition of the branch site (5'-UACUAAC-3'), the pyrimidine tract and the 3'-splice site at the 3'-end of introns (By similarity) |
|---|---|---|---|
| SGD closest match: | S000004106 | MSL5 | Branchpoint-bridging protein |
| CGD closest match: | CAL0000178990 | BBP | Branchpoint-bridging protein |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X9S3_GEOCN | 67.70% | 322 | 9e-146 | Similar to Saccharomyces cerevisiae YLR116W MSL5 Component of the commitment complex, which defines the first step in the splicing pathway OS=Geotrichum candidum GN=BN980_GECA07s00318g PE=4 SV=1 |
| UniRef50_A0A0J9X9S3 | 67.70% | 322 | 2e-142 | Similar to Saccharomyces cerevisiae YLR116W MSL5 Component of the commitment complex, which defines the first step in the splicing pathway n=5 Tax=saccharomyceta TaxID=716545 RepID=A0A0J9X9S3_GEOCN |
| MCA_04018_1 | 61.18% | 322 | 5e-135 | MCA_04018_1 |
| A0A060T4S9_BLAAD | 66.67% | 300 | 4e-133 | ARAD1C06094p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C06094g PE=4 SV=1 |
| A0A1E3PT32_9ASCO | 66.10% | 292 | 1e-132 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_45099 PE=4 SV=1 |
| A0A167C7J2_9ASCO | 58.31% | 319 | 1e-122 | Msl5p OS=Sugiyamaella lignohabitans GN=MSL5 PE=4 SV=1 |
| BBP_YARLI | 52.50% | 320 | 3e-104 | Branchpoint-bridging protein OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=BBP PE=3 SV=1 |
| A0A1E4TH52_9ASCO | 55.68% | 264 | 5e-94 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_19902 PE=4 SV=1 |
| BBP_YEAST | 54.02% | 261 | 4e-90 | Branchpoint-bridging protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSL5 PE=1 SV=1 |
| BBP_CANAL | 40.59% | 303 | 8e-66 | Branchpoint-bridging protein OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=BBP PE=3 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.2901
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
100
200
300
400
500
600
657
Detailed signature matches
no IPR
Unintegrated signatures
-
PS50084 (KH_TYPE_1)
-
cd02395 (SF1_like-KH)
-
mobidb-lite (disord...)
Residue annotation
-
RNA binding site c...
-
G-X-X-G motif cd02...
Protein sequence
>MIA_01820_1 MFDRRSRESASITGRRQQSPQGRNRSLSPERTPSIKHEHRSNYPSSSQELADTAARLDRVSSRRKKNRWGVSSDRNPFTK IYNPTVLVEAPLTPEQLEAYALVLRIEEIGFKLRENDVVPREAERSPSPTPQYNAQGKRINTPDVRYRKLLETERHKLIQ RAIKAIPNYKPPSDYRRPSKIEEKVYIPAKDYPEINFIGLLMGPRGNSLKRMESESGAKLAIRGKGSVKEGKRRNDVPNQ MNEDEPLHCLIIADEDEKIQKAIALVTKVIETAASTPEEQNTLKRNQLRELATLNGTLRDDESYSCQNCGETGHRKYNCP NRKNFTATVTCHICGGVGHFARDCKERPSAGYGNSYKSGNGFGSGAMPVSAADREYEQLMLELGAGGSGSLGAHNMNNHA PPNDHQFRLTDGSSPNNGSNAPPKNSSGAAAPWQQPQPQQQHRGGQPPQLPSMHDLPWQKRNNANNGLPPGSGGPGGVPP PGDNYRSGGPNPGRDFDRMHSRGSSNGASLNSGNSAPPPRRFDDYGRQGGPGGNAGGHGNNNGWGPSRHQSSYPPQQGYD RAHSQGSSQSPHLPPGVSSGAPGARHRPPGMAAPPGMAAPPGLPSAPPGLAPPPGLPGAPPGLRKNAPPPPPPGARSGAP QGPPGSRLPPPPPPGTK
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
GO:0003723 RNA binding
GO:0008270 zinc ion binding
Cellular Component
None predicted.