Protein

MIA_01729_1

Length
398 amino acids

Browser: contig02:1520979-1522317+

Protein function

EGGNOG:0PIGAFG06767.1UV excision repair protein
SGD closest match:S000000763RAD23UV excision repair protein RAD23
CGD closest match:CAL0000183158RAD23Rad23p

Protein alignments

%idAln lengthE-value
MCA_00684_149.259%2701.41e-65MCA_00684_1
A0A0J9X7U4_GEOCN48.638%2576.55e-60Similar to Saccharomyces cerevisiae YEL037C RAD23 Protein with ubiquitin-like N terminus OS=Geotrichum candidum GN=BN980_GECA04s06049g PE=4 SV=1
A0A060SWZ8_BLAAD45.091%2754.80e-58ARAD1A04510p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1A04510g PE=4 SV=1
A0A1E3PEU8_9ASCO42.143%2805.91e-54UV excision repair protein Rad23 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53141 PE=4 SV=1
A0A167FHB2_9ASCO44.231%2601.98e-54Rad23p OS=Sugiyamaella lignohabitans GN=RAD23 PE=4 SV=1
UniRef50_A0A167FHB244.231%2605.45e-51Rad23p n=2 Tax=Saccharomycetales TaxID=4892 RepID=A0A167FHB2_9ASCO
A0A1E4TFM1_9ASCO40.769%2607.09e-49Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_107776 PE=4 SV=1
Q6C8W3_YARLI41.350%2373.60e-46YALI0D16401p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D16401g PE=4 SV=1
RAD23_YEAST35.227%2643.63e-32UV excision repair protein RAD23 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RAD23 PE=1 SV=1
A0A1D8PGE3_CANAL68.000%501.72e-16Rad23p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RAD23 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0909

Protein family membership

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 398

Detailed signature matches

  1. Family IPR004806
    UV excision repair protein Rad23
    1. TIGR00601
    2. PR01839 (RAD23PROTEIN)
  2. Domain IPR029071
    Ubiquitin-related domain
    1. SSF54236 (Ubiquitin...)
  3. Domain IPR000626
    Ubiquitin domain
    1. SM00213 (ubq_7)
    2. PF00240 (ubiquitin)
    3. PS50053 (UBIQUITIN_2)
  4. Domain IPR009060
    UBA-like
    1. SSF46934 (UBA-like)
  5. Domain IPR015940
    Ubiquitin-associated domain
    1. SM00165 (uba_6)
    2. PF00627 (UBA)
    3. PS50030 (UBA)
  6. Domain IPR015360
    XPC-binding domain
    1. SSF101238 (XPC-bind...)
    2. PF09280 (XPC-binding)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:1.10.10...
  2. G3DSA:1.10.8.10
  3. G3DSA:3.10.20.90
  4. cd14281 (UBA2_Rad23...)
  5. mobidb-lite (disord...)

Protein sequence

>MIA_01729_1
MKVTLKDFKKSWTIEIDPTQTVLELKKLNEEQNGWSVKDQKLIFSGKILQDDKTLESYKLSESGFVVCMISKAKAPPKQA
SSPAPSQPSPAAASETSSSATTVATEPTNSTTEPPTTVAPIDETPITANTPTANTPAAAETPSAAPAFNDPFAFTTGSAR
EVAINSMIEMGYTREQVQSAMRAAFNNPDRAVEYLLTGIPDSLQQPQEQPTQTPSAQSPIEISTEREAGENTTDRTEGEV
DLFAAAAAAQNRNQDAQSSMSAMFEEFRSTPEFEQMREVIRERPEMLQTIIQQLAISYPEIQQLAISDSVGLSRMIQEAF
GIDLGDLNSDDYEDGAEGDAEGGQLPPGTIRITPEENEAIQRLVDLGFDRTLAAQAYFACDKNEELAANYLFDHGFED

GO term prediction

Biological Process

GO:0006289 nucleotide-excision repair
GO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process

Molecular Function

GO:0003684 damaged DNA binding
GO:0005515 protein binding

Cellular Component

GO:0005634 nucleus