Protein

MIA_01699_1

Length
387 amino acids

Browser: contig02:1439536-1440752+

Protein function

EGGNOG:0PH4SSLT11Involved in pre-mRNA splicing. Facilitates the cooperative formation of U2 U6 helix II in association with stem II in the spliceosome. Binds to RNA
SGD closest match:S000000269ECM2Pre-mRNA-splicing factor SLT11
CGD closest match:CAL0000189228SLT11Pre-mRNA-splicing factor SLT11

Protein alignments

%idAln lengthE-value
A0A0J9XJ23_GEOCN56.305%3413.32e-120Similar to Saccharomyces cerevisiae YBR065C ECM2 Pre-mRNA splicing factor OS=Geotrichum candidum GN=BN980_GECA18s00736g PE=4 SV=1
UniRef50_A0A0J9XJ2356.305%3416.80e-117Similar to Saccharomyces cerevisiae YBR065C ECM2 Pre-mRNA splicing factor n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XJ23_GEOCN
MCA_02405_153.699%4195.62e-117MCA_02405_1
SLT11_YARLI52.994%3346.79e-103Pre-mRNA-splicing factor SLT11 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SLT11 PE=3 SV=1
A0A060TCF8_BLAAD48.986%3452.74e-101ARAD1B16214p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B16214g PE=4 SV=1
A0A167EHZ3_9ASCO48.571%3507.26e-91Ecm2p OS=Sugiyamaella lignohabitans GN=ECM2 PE=4 SV=1
A0A1E3PLA5_9ASCO30.366%3826.43e-40Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50140 PE=4 SV=1
SLT11_CANAL26.970%3302.89e-31Pre-mRNA-splicing factor SLT11 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SLT11 PE=3 SV=1
A0A1E4THA3_9ASCO48.936%942.77e-25Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_116791 PE=4 SV=1
SLT11_YEAST27.341%2671.01e-22Pre-mRNA-splicing factor SLT11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ECM2 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0203

Protein family membership

None predicted.

Domains and repeats

  1. Domain
1 50 100 150 200 250 300 350 387

Detailed signature matches

  1. Domain IPR000504
    RNA recognition motif domain
    1. SSF54928 (RNA-bindi...)
    2. PS50102 (RRM)
    3. SM00360 (rrm1_1)
    4. PF00076 (RRM_1)
  2. Domain IPR034356
    Slt11-like, RNA recognition motif
    1. cd12265 (RRM_SLT11)
Unintegrated signatures no IPR
Unintegrated signatures
  1. G3DSA:3.30.70...
  2. mobidb-lite (disord...)

Protein sequence

>MIA_01699_1
MPPKADINKATWEDTEVPAVCERCLGSNPYIRMTRERYGAECKLCARPYTVFRWQPEGSMTGGGSAGSKKPKKTSICLTC
ARQKNCCQSCMLDLTYGLPLHIRDTALKMISSSGDSTTNTSSNMSNAIIRQYIAQNFEYNNGSTTDDLEDEERRRLMEES
EGAKNLLKHLATAMPYYKRQYPTLENTPGHLKHKQQNVDPAPVTNKALIQDVGKIASKLPLNGNNTIPKDTSITSLFIMG
IEDDLPEYAIRDYFSQYGTISSLVCIHRARCGFVNFTNRAGAEAAANSVPAPAGKLVINGCKLRIAWSKPRPLGSSHAEH
SRLGQIVRKAMRQRDFKDRANNGGRDAGAGGSAGTRKNEGSKDEILAPPSLSGPKTKYKTTQSGYEG

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding

Cellular Component

None predicted.