Protein
MIA_01643_1
Length
301 amino acids
Browser: contig02:1286137-1287043+
Protein function
| EGGNOG: | 0PN5A | MSL1 | Small nuclear ribonucleoprotein |
|---|---|---|---|
| SGD closest match: | S000001448 | MSL1 | U2 small nuclear ribonucleoprotein B'' |
| CGD closest match: | CAL0000176904 | orf19.4748 | U2 snRNP complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_00315_1 | 47.85% | 163 | 3e-39 | MCA_00315_1 |
| A0A060T2J1_BLAAD | 46.15% | 130 | 1e-27 | ARAD1C25674p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C25674g PE=4 SV=1 |
| UniRef50_A0A060T2J1 | 46.15% | 130 | 4e-24 | ARAD1C25674p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060T2J1_BLAAD |
| A0A0J9X4D3_GEOCN | 45.54% | 112 | 2e-23 | Similar to Saccharomyces cerevisiae YIR009W MSL1 U2B component of U2 snRNP OS=Geotrichum candidum GN=BN980_GECA02s04234g PE=4 SV=1 |
| Q6C824_YARLI | 43.43% | 99 | 1e-23 | YALI0D23375p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_D23375g PE=4 SV=1 |
| A0A1E3PSW7_9ASCO | 39.05% | 105 | 4e-17 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81341 PE=4 SV=1 |
| A0A1E4TF78_9ASCO | 36.90% | 84 | 2e-13 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_105128 PE=4 SV=1 |
| A0A1D8PEI3_CANAL | 29.21% | 89 | 2e-08 | U2 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4748 PE=4 SV=1 |
| MSL1_YEAST | 27.27% | 99 | 1e-08 | U2 small nuclear ribonucleoprotein B'' OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MSL1 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0470
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
301
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MIA_01643_1 MSRTNDEHPEPAIEPAEAADAAEPARRSTRGRKAAAKLADAPDLAPDQGEEPASSPKKTPRKSPRKAKESPKKTPKKSPK KTLKTAPKPETEEQPEHEEPEKEPQQEPEKHQEQKPEEADGAIKETQSKAAPVSLPPAPASLPPAPRAASSVNPASAGTH TETPQAFLGAPNCTLYLNNLNDQVTTDVLRRTLYVAFSPYGHVVSVTASKAKGMRGQAFVAYGNVSAAAAAARAMQGVHL LGKKVRLQYARTKSQAVAKLDGTFRAAGPQQLNPGPLSAATTAATLDQEIKYEEDSDMEDV
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.