Protein

MIA_01590_1

Length
1,235 amino acids

Browser: contig02:1143448-1147211-

Protein function

EGGNOG:0PGD2RSE1Pre-mRNA-splicing factor rse1
SGD closest match:S000004513RSE1Pre-mRNA-splicing factor RSE1
CGD closest match:CAL0000182953RSE1Pre-mRNA-splicing factor RSE1

Protein alignments

%idAln lengthE-value
MCA_00356_161.151%12510.0MCA_00356_1
A0A0J9XF38_GEOCN52.941%12240.0Similar to Saccharomyces cerevisiae YML049C RSE1 Protein involved in pre-mRNA splicing OS=Geotrichum candidum GN=BN980_GECA14s00109g PE=4 SV=1
UniRef50_A0A0J9XF3852.941%12240.0Similar to Saccharomyces cerevisiae YML049C RSE1 Protein involved in pre-mRNA splicing n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XF38_GEOCN
A0A161HHZ2_9ASCO50.555%12620.0Rse1p OS=Sugiyamaella lignohabitans GN=RSE1 PE=4 SV=1
A0A060THS1_BLAAD50.856%12270.0ARAD1D33616p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D33616g PE=4 SV=1
A0A1E3PTE6_9ASCO41.444%12740.0Putative splicing factor 3B subunit 3 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_48752 PE=4 SV=1
A0A1E4TDB4_9ASCO38.091%12050.0Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32879 PE=4 SV=1
RSE1_CANAL35.266%12420.0Pre-mRNA-splicing factor RSE1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RSE1 PE=3 SV=1
RSE1_YARLI30.531%12251.92e-152Pre-mRNA-splicing factor RSE1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=RSE1 PE=3 SV=1
RSE1_YEAST29.779%7691.12e-74Pre-mRNA-splicing factor RSE1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RSE1 PE=1 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.7106

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 200 400 600 800 1000 1235

Detailed signature matches

  1. Domain IPR015943
    WD40/YVTN repeat-like-containing domain
    1. G3DSA:2.130.1...
  2. Domain IPR017986
    WD40-repeat-containing domain
    1. SSF50978 (WD40 repe...)
  3. Domain IPR004871
    Cleavage/polyadenylation specificity factor, A subunit, C-terminal
    1. PF03178 (CPSF_A)
Unintegrated signatures no IPR
Unintegrated signatures
  1. PF10433 (MMS1_N)

Protein sequence

>MIA_01590_1
MSSKTLTAGANSSSPPLHLYSVTLKKPTAFIKSIVGQFSGKRSQDIIVIRGSYIDLYHINKETEKLELQTSYNLFGIIRS
VAPFRIAGSSKDHIIITSDSGRVAILDYNPDKNVFEQLHLETFGKSGIRRIVPGQYLTVDPKGRAALIASVEKNKLVYVL
NRDSAANVTISSPLEAHTPRTIVYDVISVDVGYENPIFAALEVDYTHAESDPTGAAYEEVEKKITFYELDLGLNHVVRKW
TAPVDKNSNILLQVPGPDGENILPSGVLIGTNGYISYRNMNQPELRVPIPRRHGTDPATAPPTSIVSGIMHKNHDDFFFI
VQNELGDLFKVELEHDGENVIDLTIRYFDTIPLTISLNILKSGFLFASCENGNHGFYRFLSLGYESGEVEVFSSRNFTDG
EMNRYSSSYFSPRPLTNLELVHEIKALHPLIGSQVLHLDQTQDIPQIYTVGGQGANSHLQSLVHGMDISEIVASELPDTP
IGVWTVKVTDVDEFDKYIVFSFRDRTLVLSVGDNVEEVTDSGFSLEVSTLAVEQLGRDSILQVHEGGIRHISSNKKVSEW
EPPRGCRVTCATTNNFQIAIALSNNCIVYFELDDEGQLNEYEEHKELPSAPVAMSIGKVPEGKLRSLFLAVGCDDSTIRI
LSLDLDSTLEPLTMAALTAPPNDVLIHSMFDNSYVPKSKDGSSLPPPPSTLYLHIGLSNGVYVMSQIEDITGQLSNTRKR
FLGPKKVKLVPIRHNSQNCLLALSSTPWMGYMNGVNYEMTPLVCSSLSYAAGLSIEQNEEAIVGTKDNLIQIFSVNDVGE
KLFQRSVPLKFSPRRFTKNSFSPYFYVAEADNHTRVTQSENPNTNGKTNGHHDEKIKEEVKESYEELDPVQAGYPKVLKS
WASAIQVVSPLTQEVLDTVILDNNEAALSIANCYFISHEREFLVVATSCDTEVLPKKSSGGYIHVYEYKDKGRKLNLLHK
TKVTTTPSAMIEFQGRLLVGMGDLLGIYELGIKQLLRKAETKLNLTTIITLDTQGSRIVVGDVRESITFVVYKPVTNSLI
AFADDVVSRHITSAIMLDYDTVLAGDRFGNIFVLRCPAAASRASDEDDYGGTILNQQGYLGGTGTKLELLAHYFVGDIVT
GLSRAALAVGGRQSVIYTGIQGTVGAIVPFATKKDGEFMAQLERQMRVQAPPMAGRNHLVYRGYYAPVKMVVDGDLCEQF
GGLPGSVQDTIAKDLERSVKDISRKIDDIRIGSVF

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0005515 protein binding

Cellular Component

GO:0005634 nucleus