Protein

MIA_01457_1

Length
624 amino acids

Browser: contig02:784226-786101-

Protein function

EGGNOG:0PQWJDEAD/DEAH box helicase
SGD closest match:S000001107RRP3ATP-dependent rRNA helicase RRP3
CGD closest match:CAL0000185988DBP3ATP-dependent RNA helicase DBP3

Protein alignments

%idAln lengthE-value
MCA_00399_141.265%6011.09e-137MCA_00399_1
A0A0J9XC14_GEOCN37.002%6276.65e-86Similar to Saccharomyces cerevisiae YLR276C DBP9 ATP-dependent RNA helicase of the DEAD-box family involved in biogenesis of the 60S ribosomal subunit OS=Geotrichum candidum GN=BN980_GECA08s03865g PE=4 SV=1
UniRef50_A0A0J9XC1437.002%6271.36e-82Similar to Saccharomyces cerevisiae YLR276C DBP9 ATP-dependent RNA helicase of the DEAD-box family involved in biogenesis of the 60S ribosomal subunit n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XC14_GEOCN
A0A1E3PM83_9ASCO27.512%6073.73e-44Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_50223 PE=4 SV=1
A0A167DL74_9ASCO26.381%5615.61e-38Uncharacterized protein OS=Sugiyamaella lignohabitans GN=AWJ20_1312 PE=4 SV=1
Q6CF17_YARLI30.389%2832.62e-26YALI0B11066p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B11066g PE=4 SV=1
A0A1E4TI63_9ASCO31.176%1703.91e-16Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_32059 PE=4 SV=1
A0A060T2Q6_BLAAD37.895%952.13e-08ARAD1C30096p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C30096g PE=3 SV=1
DBP3_CANAL33.645%1071.20e-07ATP-dependent RNA helicase DBP3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=DBP3 PE=3 SV=1
RRP3_YEAST31.250%964.49e-07ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP3 PE=1 SV=2

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.8315
Predicted cleavage: 28

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Domain
1 100 200 300 400 500 624

Detailed signature matches

  1. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  2. Domain IPR014014
    RNA helicase, DEAD-box type, Q motif
    1. PS51195 (Q_MOTIF)
  3. Domain IPR014001
    Helicase superfamily 1/2, ATP-binding domain
    1. PS51192 (HELICASE_A...)
    2. SM00487 (ultradead3)
  4. Domain IPR011545
    DEAD/DEAH box helicase domain
    1. PF00270 (DEAD)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.40.50...

Protein sequence

>MIA_01457_1
MLLSRLKSPVVSCGCMRRAFSTRKEKIVQRVQSEMERDMEQAKANEDGITIKIDPTTAKTFEDLQIRPAIINSMKRAFPD
IAGPTKTQRNMLALLNSDMSLLVKSPAGTGKTLATALYLLNTTAPPALRQTTGEDGAASITNLLIVPTAALAEQYREVLE
KLVAGTGLEAAQVVQAVYRTDKAGEIAQKERLREYPSPHILVGTPARLLDLLSSGARARVPLHGVYVVAMDEADTLLPMA
SLHARVKQTRKVMRHRPVAQTKLPTQLLLDHIVAWRNAWVQKNAPAFVPLKVLMESSTVSSRLKAEAMKRGWAGGRPMLR
LDLESPVRQGSQQQHLVVESQGPRDVCSYFVTYNPFLDTLENTNYDVSSVLPEMTQNAFDVVSEVNDQRVKGHVQEYASL
SKPQREKLLGVYAAGLVKAINMDAARNGDAKPRRALVIVPEAFSISVLLKILETRYKIRGGTIATVGNSSGVYCEEKSAE
GVASGEGEPARMVKADAGRLFLKGREETEAGNGEALPQVVLARARAVAGLDFPGLDRIYALGWDSLLSSKTYLSVAGRCR
VAPASERNKTISAAGFWKAPEDPEQGKFVVISTIDEIKDMRYLMLLAVSMAKIGVVQQSFVNNQ

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0003676 nucleic acid binding
GO:0005524 ATP binding

Cellular Component

None predicted.