Protein

MIA_01379_1

Length
1,029 amino acids

Browser: contig02:545469-548559+

Protein function

EGGNOG:0PG5PRDH54dna repair and recombination protein
SGD closest match:S000000277RDH54DNA repair and recombination protein RDH54
CGD closest match:CAL0000199325RDH54DNA-dependent ATPase

Protein alignments

%idAln lengthE-value
MCA_00612_158.939%8670.0MCA_00612_1
A0A0J9XBQ3_GEOCN55.247%8290.0Similar to Saccharomyces cerevisiae YBR073W RDH54 DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA OS=Geotrichum candidum GN=BN980_GECA08s03167g PE=4 SV=1
UniRef50_A0A0J9XBQ355.247%8290.0Similar to Saccharomyces cerevisiae YBR073W RDH54 DNA-dependent ATPase, stimulates strand exchange by modifying the topology of double-stranded DNA n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9XBQ3_GEOCN
A0A1E3PNU9_9ASCO54.570%7440.0Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_49534 PE=4 SV=1
A0A167FD72_9ASCO49.277%8300.0DNA-dependent ATPase RDH54 OS=Sugiyamaella lignohabitans GN=RDH54 PE=4 SV=1
A0A060T1Y1_BLAAD44.499%8180.0ARAD1C24750p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C24750g PE=4 SV=1
Q6C4R0_YARLI45.021%7130.0YALI0E24431p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E24431g PE=4 SV=1
RDH54_YEAST39.898%7873.20e-164DNA repair and recombination protein RDH54 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RDH54 PE=1 SV=4
A0A1E4TCU5_9ASCO41.553%7341.07e-166Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_13489 PE=4 SV=1
Q5A5N2_CANAL39.916%7143.51e-156DNA-dependent ATPase OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RDH54 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.4199
Predicted cleavage: 32

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
  3. Domain
1 100 200 300 400 500 600 700 800 900 1029

Detailed signature matches

  1. Domain IPR027417
    P-loop containing nucleoside triphosphate hydrolase
    1. SSF52540 (P-loop co...)
  2. Domain IPR014001
    Helicase superfamily 1/2, ATP-binding domain
    1. PS51192 (HELICASE_A...)
    2. SM00487 (ultradead3)
  3. Domain IPR000330
    SNF2-related, N-terminal domain
    1. PF00176 (SNF2_N)
  4. Domain IPR001650
    Helicase, C-terminal
    1. PS51194 (HELICASE_CTER)
    2. SM00490 (helicmild6)
    3. PF00271 (Helicase_C)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. G3DSA:3.40.50...
  3. G3DSA:3.40.50...
  4. cd00046 (DEXDc)
  5. cd00079 (HELICc)
  6. mobidb-lite (disord...)

Residue annotation

  1. ATP binding site c...
  2. putative Mg++ bind...
  3. nucleotide binding...
  4. ATP-binding site c...

Protein sequence

>MIA_01379_1
MYRRRAPVSDPSSSSSASKPNAPFKPVICRPSSSSSATDHHEPVKNLGSRPPPLSSQQGLKRHTPENQDTNSHDPLSSSP
SLSLHTRAPGVPIKRLKSQSTVVPSAACRPVTNRVPTTSQTTTSPPPEKSANQYFEVVWRKVTTKKNKTWDGDGLLTLAT
DGAVTLEGSNGRVLARSRVQGKLCVDHFLKVGHLEVEISAVVSPQDKDTLFLDKTVFPLVKSKAPQTSFHSPLGHNTQSS
LTRSGIIPRANQGNILSMRHDPNDPNAHVLPRPVTAPPSGKSVIDVVIDPLLGRYLRPHQVTGVQFLYECVMGYRNFQGR
GALLADEMGLGKTLMTITLIWTLLKQTPIEGNLPIIQRALIVCPVTLINNWKKEFRKWLGPMRIGVFVVDSKANIRTFVG
SRIYQVIIVGYERLRSISPYLQKASIDLIVCDEGHRLKSANNKSAQAILSLPTQRRIILSGTPIQNDLGEFFTMVDFLNP
GILGTYATFKKEFEVPILKSRQPEALTKDIEKGRIRSEELSKLTRLFTLRRTADTLDKYLPPKTDAVIFCRPTVRQAELY
KMLVESSSIKKCLGSNVAADHLRAITMLKKLCNSPALLKDSDFGALNLPPTLPFSSGKLQFLLQFLRVLYATTKEKVVIV
SGYTQTLDVIEDALKEEHFTLLRLDGSTPTNKRQPLVDKFNSAINKDAFVFLLSSKSGGTGLNLVGASRLFLFDTDWNPS
VDLQAMARVHRDGQKRPVYVYRLLTTGAMDEKIFQRQITKQSLAESFMNGRHEGEEIVNKNNSGPKTLRKSSAGISMGSS
NTNSFSLAELQDLFTFHEHTKCHTHDLLGCSCQSKLTGDEVNTGNQPATRNLTYDEQMHISSQQANDAAEDSDSSACFLD
GDEEKDDDTDDEKPKSNEKEIDRPSKRFGGWTTARDVVEGTAPIPEVLRERAKGKMKGLFEYRHIDVDAFLMRRQSRSGS
SGSSSVVSFSSNAASQEDNGEEVVEEEDESIDDEIYIGDAVLAQVITAEKRGRMAVSYIFTKNSKNIEN

GO term prediction

Biological Process

None predicted.

Molecular Function

GO:0005524 ATP binding

Cellular Component

None predicted.