Protein
MIA_01320_1
Length
904 amino acids
Browser: contig02:357563-360278-
Protein function
| EGGNOG: | 0PHVG | SNF5 | SWI-SNF complex subunit (Snf5) |
|---|---|---|---|
| SGD closest match: | S000000493 | SNF5 | SWI/SNF chromatin-remodeling complex subunit SNF5 |
| CGD closest match: | CAL0000195495 | SNF5 | Snf5p |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_00634_1 | 70.207% | 386 | 1.75e-164 | MCA_00634_1 |
| A0A0J9X3S4_GEOCN | 50.380% | 526 | 5.69e-141 | Similar to Saccharomyces cerevisiae YBR289W SNF5 Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation OS=Geotrichum candidum GN=BN980_GECA02s00593g PE=4 SV=1 |
| UniRef50_A0A0J9X3S4 | 50.380% | 526 | 1.16e-137 | Similar to Saccharomyces cerevisiae YBR289W SNF5 Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X3S4_GEOCN |
| A0A060T6D0_BLAAD | 49.127% | 401 | 6.37e-97 | ARAD1C18546p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C18546g PE=4 SV=1 |
| A0A167C3R9_9ASCO | 45.181% | 498 | 1.87e-93 | Snf5p OS=Sugiyamaella lignohabitans GN=SNF5 PE=4 SV=1 |
| Q6C625_YARLI | 50.270% | 370 | 2.45e-90 | YALI0E13101p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E13101g PE=4 SV=1 |
| A0A1E3PIX0_9ASCO | 43.807% | 436 | 1.60e-83 | SNF5-domain-containing protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_52420 PE=4 SV=1 |
| A0A1E4TFX4_9ASCO | 44.892% | 372 | 1.79e-73 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_109342 PE=4 SV=1 |
| SNF5_YEAST | 37.124% | 299 | 4.82e-50 | SWI/SNF chromatin-remodeling complex subunit SNF5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNF5 PE=1 SV=3 |
| A0A1D8PJZ6_CANAL | 36.426% | 291 | 4.15e-43 | Snf5p OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SNF5 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1343
Protein family membership
- SNF5/SMARCB1/INI1 (IPR006939)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF04855 (SNF5)
-
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MIA_01320_1 MSYDNINMSQFQSRQQQQQQQQQPSQQSQPQQQQQQQPQQQPQQQPQQPSQPNLLSQLTLQQQAQLRARFLQIHQQFPNG VPQEVYIQFQREIQQQARQNANFHPGALRPQQQQQPQQQPQLQQQQQQFANSPSQIHSQVSTPQIAHNPIYSNPSPVMAQ QQPQATEQNSTQLSSSSPSSNVGRLPFQNMPQHFQQQQQPQQQQSQQVQAQTQNMSPKIPVSTMPQRPSQQLPPQLQQQL PQQQLQQIQGQFQPPNVSPQIQHLSPQMQSSVLNKFQNANVSAGNRPSVGAPGTGPGSSGAPAGVLPNRLPPSTQQSFQQ QQSPQQSLMSSHHNKLPPQPQPNSQPSSGSQFHPSGPPQPIGGPARGAGGPLLPPQQSAQKPSVGSVPSDFQGPRNTQIS NSSQVPQDRPHSPEPIDLSTPEEILKVLKALPPPENMTAAKVEKYLEADSLYEQHMDYVHDRFNRIIKRKRTELQYFNQV LTVRQQQPGSLFSGGYVGYGNGWTGNRFDLELVYPKKRKRNNRVSTEPNPTQQQLENIAEHTETLVPIRLDIEMDKYRLR DTFTWNLKEYSIPISTFAENLVEDYYLPQSLASSVASAMNEQIKDFVPHSYVDISEPKYANSSMYRDEDMRINIKLDITV GQHNLVDQFEWDINCAENSPEEFAETLCKELGLSGEFMTAIAHSIREQQELFTKTLYLIQYPFDGTPVEDEDLRREFNPP ITVDYLRNKSHLKEYSPALFEISELELDRQDRDRDRDSRRKRRQGRAGRRNGPALPDLRESLRSFRTPVYSTTLPGGLDR NVELLRRMRQKELFGDNDDGIVQVSAAGGASGLGPSGAPSGPKPVGRPPLHRNINNNNNLAVYGGGSHYSTSAAIHTPER FMVTLKIPPRLRPFLEQIRRTRFA
GO term prediction
Biological Process
GO:0006338 chromatin remodeling
Molecular Function
None predicted.
Cellular Component
GO:0000228 nuclear chromosome