Protein
MIA_01287_1
Length
179 amino acids
Browser: contig02:254387-254927-
Protein function
| EGGNOG: | 0PQ47 | SNU23 | Inherit from opiNOG: Zinc finger matrin-type |
|---|---|---|---|
| SGD closest match: | S000002256 | SNU23 | 23 kDa U4/U6.U5 small nuclear ribonucleoprotein component |
| CGD closest match: | CAL0000175942 | orf19.1548 | U4/U6-U5 snRNP complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_00217_1 | 59.483% | 116 | 8.68e-45 | MCA_00217_1 |
| A0A0J9XEM6_GEOCN | 51.235% | 162 | 1.80e-35 | Similar to Saccharomyces cerevisiae YDL098C SNU23 Component of U4/U6.U5 snRNP involved in mRNA splicing via spliceosome OS=Geotrichum candidum GN=BN980_GECA12s01682g PE=4 SV=1 |
| A0A167CX48_9ASCO | 43.275% | 171 | 4.21e-35 | Snu23p OS=Sugiyamaella lignohabitans GN=SNU23 PE=4 SV=1 |
| UniRef50_A0A167CX48 | 43.275% | 171 | 1.16e-31 | Snu23p n=2 Tax=Trichomonascaceae TaxID=410830 RepID=A0A167CX48_9ASCO |
| Q6C2A9_YARLI | 42.945% | 163 | 2.21e-33 | YALI0F09361p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F09361g PE=4 SV=1 |
| A0A1E3PGP1_9ASCO | 37.566% | 189 | 1.87e-27 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_42889 PE=4 SV=1 |
| A0A060T6Q0_BLAAD | 49.438% | 89 | 7.14e-27 | ARAD1B13794p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1B13794g PE=4 SV=1 |
| SNU23_YEAST | 56.000% | 50 | 3.85e-14 | 23 kDa U4/U6.U5 small nuclear ribonucleoprotein component OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNU23 PE=1 SV=1 |
| A0A1E4TEU7_9ASCO | 39.344% | 61 | 8.42e-11 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_2022 PE=4 SV=1 |
| A0A1D8PGM6_CANAL | 42.500% | 40 | 3.56e-06 | U4/U6-U5 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.1548 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0694
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
20
40
60
80
100
120
140
160
179
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MIA_01287_1 MSSNKDDPMQSSIAPPRGDTIDFYQDLNKVTLVSGTAAVGKRGKGVGFYCEACNLTFKDSIQWIDHINSKQHLYNTTGTT DLEAANARLTVDDVRTRLKYLKEKRERDLKESGMEFSLKQRIETREKFEREEAERKRKKRLDKKKRQRESKKRKREEPVG ELNHVQTMMGFSGFGSTKN
GO term prediction
Biological Process
GO:0006259 DNA metabolic process
GO:0006265 DNA topological change
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity
GO:0005524 ATP binding
GO:0008270 zinc ion binding
Cellular Component
None predicted.