MIA_01169_1

Protein

Length

179 amino acids

Protein function

EGGNOG:	0PJFV	FG01016.1	60S ribosomal protein L6
SGD closest match:	S000004538	RPL6A	60S ribosomal protein L6-A
CGD closest match:	CAL0000181737	RPL6	60S ribosomal protein L6

Protein alignments

	%id	Aln length	E-value
MCA_04466_1	86.857%	175	3.06e-102	MCA_04466_1
A0A1D8PCX8_CANAL	73.256%	172	1.13e-87	60S ribosomal protein L6 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=RPL6 PE=3 SV=1
A0A060TG34_BLAAD	73.143%	175	1.10e-86	ARAD1D27720p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D27720g PE=4 SV=1
A0A1E3PK79_9ASCO	70.349%	172	4.69e-86	60S ribosomal protein L6 OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_46451 PE=3 SV=1
A0A0J9XDT1_GEOCN	74.419%	172	7.89e-83	Similar to Saccharomyces cerevisiae YML073C RPL6A N-terminally acetylated protein component of the large (60S) ribosomal subunit OS=Geotrichum candidum GN=BN980_GECA11s02375g PE=4 SV=1
UniRef50_G8BQB7	66.477%	176	9.70e-78	60S ribosomal protein L6 n=23 Tax=Fungi TaxID=4751 RepID=G8BQB7_TETPH
RL6A_YEAST	66.477%	176	1.99e-78	60S ribosomal protein L6-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPL6A PE=1 SV=2
Q6C4C8_YARLI	67.251%	171	1.15e-75	60S ribosomal protein L6 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E27830g PE=3 SV=1
A0A1E4TAL3_9ASCO	51.366%	183	1.10e-56	Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_128055 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.1572

Protein family membership

60S ribosomal protein L6E (IPR000915)

Domains and repeats

Domain
33 - 156
Ribosomal protein L2 domain 2 (IPR014722)
Domain
34 - 116
Translation protein SH3-like domain (IPR008991)

1 20 40 60 80 100 120 140 160 179

Detailed signature matches

IPR000915

60S ribosomal protein L6E
1. PF01159 (Ribosomal_L6e)
  
  73 - 179
  
  Pfam
  PF01159 (Ribosomal_L6e)
IPR014722

Ribosomal protein L2 domain 2
1. G3DSA:2.30.30.30
  
  33 - 156
  
  GENE3D
  G3DSA:2.30.30.30 (G3DSA:2.30.30.30)
IPR008991

Translation protein SH3-like domain
1. SSF50104 (Translati...)
  
  34 - 116
  
  SUPERFAMILY
  SSF50104 (Translation proteins SH3-like domain)

no IPR

Unintegrated signatures

cd13156 (KOW_RPL6)

28 - 179

CDD
cd13156 (KOW_RPL6)

Residue annotation

RNA binding site c...

28N

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

30T

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

46A

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

47G

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

48R

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

49F

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

50R

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

52K

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

63N

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

64T

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

71F

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

72K

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

73V

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

74N

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

75G

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

77P

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

79R

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

80R

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

81V

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

82N

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

84R

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

85Y

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

110R

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

134K

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

137R

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

138V

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

160R

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

163A

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

164T

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

165S

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

169K

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

170N

RNA binding site
28N, 30T, 46A, 47G, 48R, 49F, 50R, 52K, 63N, 64T, 71F, 72K, 73V, 74N, 75G, 77P, 79R, 80R, 81V, 82N, 84R, 85Y, 110R, 134K, 137R, 138V, 160R, 163A, 164T, 165S, 169K, 170N
CDD
cd13156 (KOW_RPL6)

Protein sequence

>MIA_01169_1
MTARTVRGAKNWYPTEDLVKKNTPQVQNPTKLRSSLVPGTILIILAGRFRGKRVVYLKALEDNTLLVSGPFKVNGVPLRR
VNARYVIATSTRINVSGVDTKKFDVSYFTREKKAKDAVTEEEFFGDKQEKKEVKAERVADQKEVDSALLAEIKKQPLLKR
YIATSFSLKNGDKPHLLKF

GO term prediction

Biological Process

GO:0006412 translation

Molecular Function

GO:0003735 structural constituent of ribosome

Cellular Component

GO:0005622 intracellular
GO:0005840 ribosome

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Entry type

Status

Per-residue features