Protein
MIA_00937_1
Length
168 amino acids
Browser: contig01:2650557-2651183+
Protein function
| EGGNOG: | 0PMXS | PGUG_01448 | U1 small nuclear ribonucleoprotein |
|---|---|---|---|
| SGD closest match: | S000001323 | SNP1 | U1 small nuclear ribonucleoprotein 70 kDa homolog |
| CGD closest match: | CAL0000189398 | orf19.6866 | U1 snRNP complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_00593_2 | 65.217% | 161 | 1.11e-68 | MCA_00593_2 |
| A0A0J9XHK0_GEOCN | 55.975% | 159 | 5.01e-59 | Similar to Saccharomyces cerevisiae YIL061C SNP1 Component of U1 snRNP required for mRNA splicing via spliceosome OS=Geotrichum candidum GN=BN980_GECA16s02694g PE=4 SV=1 |
| A0A1E3PQM1_9ASCO | 57.419% | 155 | 2.84e-60 | RNA-binding domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_8147 PE=4 SV=1 |
| A0A060T9U6_BLAAD | 55.844% | 154 | 2.17e-57 | ARAD1D17314p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D17314g PE=4 SV=1 |
| UniRef50_G2QBQ8 | 46.243% | 173 | 9.10e-48 | Uncharacterized protein n=2 Tax=leotiomyceta TaxID=716546 RepID=G2QBQ8_MYCTT |
| Q6C6B0_YARLI | 46.286% | 175 | 5.51e-45 | YALI0E10989p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E10989g PE=4 SV=1 |
| A0A167D5E7_9ASCO | 54.902% | 102 | 1.38e-34 | Snp1p OS=Sugiyamaella lignohabitans GN=SNP1 PE=4 SV=1 |
| A0A1D8PHF1_CANAL | 37.714% | 175 | 8.13e-33 | U1 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6866 PE=4 SV=1 |
| RU17_YEAST | 40.000% | 160 | 3.81e-28 | U1 small nuclear ribonucleoprotein 70 kDa homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SNP1 PE=1 SV=1 |
| A0A1E4TC82_9ASCO | 45.455% | 55 | 1.93e-12 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_4003 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.4412
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
20
40
60
80
100
120
140
168
Detailed signature matches
-
-
PF12220 (U1snRNP70_N)
-
no IPR
Unintegrated signatures
Protein sequence
>MIA_00937_1 MLYVSRLPPYVANLFTPRPPLPYVRPVDVPPEQRSNPKISGVSQYLDLLKAEKESTTYTPTESWFVKQQREKREKQSEHV KELKKAVRKWNPQKDPQVRGDPFKTIFVARLDYSVTESDLEREFNRYGPIEKIRVVRETETGKSRGYAFIVYERESDSKG KIEWGEKV
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.