Protein
MIA_00913_1
Length
567 amino acids
Browser: contig01:2568246-2569950+
Protein function
| EGGNOG: | 0PGY2 | RPC53 | RNA polymerase III |
|---|---|---|---|
| SGD closest match: | S000002309 | RPC53 | DNA-directed RNA polymerase III subunit RPC4 |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_03729_1 | 39.145% | 304 | 8.04e-42 | MCA_03729_1 |
| A0A0J9X6R1_GEOCN | 66.197% | 71 | 1.77e-24 | Similar to Saccharomyces cerevisiae YDL150W RPC53 DNA-directed RNA polymerase III OS=Geotrichum candidum GN=BN980_GECA04s00615g PE=4 SV=1 |
| UniRef50_A0A0J9X6R1 | 66.197% | 71 | 3.62e-21 | Similar to Saccharomyces cerevisiae YDL150W RPC53 DNA-directed RNA polymerase III n=1 Tax=Geotrichum candidum TaxID=1173061 RepID=A0A0J9X6R1_GEOCN |
| A0A060T6V2_BLAAD | 57.534% | 73 | 9.58e-24 | ARAD1C16566p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1C16566g PE=4 SV=1 |
| Q6C321_YARLI | 60.000% | 70 | 1.24e-20 | YALI0F03300p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_F03300g PE=4 SV=1 |
| A0A167EJD9_9ASCO | 58.462% | 65 | 5.29e-20 | Rpc53p OS=Sugiyamaella lignohabitans GN=RPC53 PE=4 SV=1 |
| A0A1E3PNE0_9ASCO | 63.636% | 44 | 6.52e-14 | Uncharacterized protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_81592 PE=4 SV=1 |
| RPC4_YEAST | 49.231% | 65 | 7.02e-12 | DNA-directed RNA polymerase III subunit RPC4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPC53 PE=1 SV=2 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.7848
Predicted cleavage: 86
Protein family membership
- DNA-directed RNA polymerase III subunit RPC4 (IPR007811)
Domains and repeats
None predicted.
Detailed signature matches
-
-
PF05132 (RNA_pol_Rpc4)
-
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Protein sequence
>MIA_00913_1 MPPKPPPPRPSRLSSLARPAPGGTPVRPSSAGSAGSAGSAGSAGSAGSPNTPVQPPHEGSTNTPASSSSASPAPAAAPAG ASARRPGFMPKMVVRRSREERERTAPTLSKTPAPPPPASASASGPGGSARGGGGRGGRGGGNARGGSARGGGRGGGRGGR RGRFEPMQTQAVGAFASLDAAEFRGRRFSPAVEVRGGALDPAQAGRYMSASPSVLKADGTPGKSEPGEDDDEDDADQNAF NMTRSLGIDIDEFFPIRPVRDNEREAASSGADKEAGVVRFDAREFDADDLEVAPAADSSDLERSVSPKVDAAGDVIMGEE GSVKQESKDKKPTGLQAMLAHKQRQQEIKAHSRSATPFIPAARAAAYISPEEMVELKRVSRDHKAILSEFMGSSAGSSSR EPSSTPAEGTPGGDEEEGAAEAKRPEIEHKLYFFQMPVVTPTFAAATDPDAQMPDAPSAAPPSTSASDASRAAAAAAAAS TPSSASAAATMDDLRQQYPEGMVGKLRVHKSGRLTMTMGPVVMEVSQGTLANFLQDVVVFDQAAEQAFLIGQVTRKMVVT PDITSLM
GO term prediction
Biological Process
GO:0006383 transcription from RNA polymerase III promoter
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
Cellular Component
GO:0005666 DNA-directed RNA polymerase III complex