Protein
MIA_00732_1
Length
300 amino acids
Browser: contig01:2076674-2077625+
Protein function
| EGGNOG: | 0PHEN | FG07342.1 | Splicing factor 3B subunit 4 |
|---|---|---|---|
| SGD closest match: | S000005846 | HSH49 | Protein HSH49 |
| CGD closest match: | CAL0000197531 | orf19.2261 | U2 snRNP complex subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MCA_00150_1 | 83.173% | 208 | 1.07e-129 | MCA_00150_1 |
| A0A0J9X5R5_GEOCN | 67.164% | 201 | 1.31e-97 | Similar to Saccharomyces cerevisiae YOR319W HSH49 U2-snRNP associated splicing factor with similarity to the mammalian splicing factor SAP49 OS=Geotrichum candidum GN=BN980_GECA03s03684g PE=4 SV=1 |
| UniRef50_K5WZT5 | 64.216% | 204 | 2.92e-89 | Uncharacterized protein n=11 Tax=Eukaryota TaxID=2759 RepID=K5WZT5_PHACS |
| A0A060TBL8_BLAAD | 59.204% | 201 | 8.90e-90 | ARAD1D28600p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D28600g PE=4 SV=1 |
| Q6C5T3_YARLI | 59.204% | 201 | 5.91e-87 | YALI0E15356p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E15356g PE=4 SV=1 |
| A0A1E3PN42_9ASCO | 60.914% | 197 | 2.50e-86 | RNA-binding domain-containing protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_13040 PE=4 SV=1 |
| A0A167C5R8_9ASCO | 57.971% | 207 | 1.71e-84 | Hsh49p OS=Sugiyamaella lignohabitans GN=HSH49 PE=4 SV=1 |
| A0A1E4TL52_9ASCO | 46.701% | 197 | 3.30e-65 | Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_11489 PE=4 SV=1 |
| A0A1D8PHX6_CANAL | 42.544% | 228 | 3.61e-59 | U2 snRNP complex subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.2261 PE=4 SV=1 |
| HSH49_YEAST | 35.784% | 204 | 8.39e-36 | Protein HSH49 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HSH49 PE=1 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1659
Protein family membership
None predicted.
Domains and repeats
-
Domain
1
50
100
150
200
250
300
300
Detailed signature matches
no IPR
Unintegrated signatures
-
-
mobidb-lite (disord...)
Protein sequence
>MIA_00732_1 MSTRPAKESERNQEATVYIGNIDENADDELICELMIQAGPLVSVHLPKDRVNQVHQGFGFAEYLNERDAEYAALIMNGVR LYGKVLRVNKALLDKQKAIDVGADLYIGNLDSMVDEGVLADTFSVFGNFVNQPKVARDPDTGAPKGYGFVSFDSFEASDR ALESMNGQYLMNKPLVINYAYKRDGKGERHGDEAERLLAAQAQKNNYKLPSQLPQQPQLPLQQLQPPPIPPPFSTPQAQI PQQYPPQHPVPQFGNMKLVRGPNGIMQSTTPMAPAASAPPPAFPAVPPPFLSGPPNYDYR
GO term prediction
Biological Process
None predicted.
Molecular Function
GO:0003676 nucleic acid binding
Cellular Component
None predicted.