Protein

MIA_00670_1

Length
369 amino acids

Browser: contig01:1915930-1917040-

Protein function

EGGNOG:0PHTHPGUG_044573' exoribonuclease family, domain 1
SGD closest match:S000000631RRP43Exosome complex component RRP43
CGD closest match:CAL0000184319orf19.6259Exosome non-catalytic core subunit

Protein alignments

%idAln lengthE-value
MCA_00450_149.724%3623.87e-93MCA_00450_1
A0A167DCM4_9ASCO34.097%3498.41e-45Rrp43p OS=Sugiyamaella lignohabitans GN=RRP43 PE=4 SV=1
UniRef50_A0A167DCM434.097%3492.31e-41Rrp43p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167DCM4_9ASCO
A0A0J9X8Z9_GEOCN36.148%3792.58e-42Similar to Saccharomyces cerevisiae YCR035C RRP43 Exosome non-catalytic core component, involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm OS=Geotrichum candidum GN=BN980_GECA05s04531g PE=4 SV=1
A0A060T8H5_BLAAD33.043%3451.90e-35ARAD1D11418p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D11418g PE=4 SV=1
A0A1E3PDP4_9ASCO31.250%3687.86e-32Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53675 PE=4 SV=1
Q6CEK7_YARLI31.024%3326.28e-29YALI0B14905p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B14905g PE=4 SV=1
RRP43_YEAST25.706%3543.20e-15Exosome complex component RRP43 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP43 PE=1 SV=2
A0A1D8PDW1_CANAL22.287%3413.46e-10Exosome non-catalytic core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6259 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0192

Protein family membership

None predicted.

Domains and repeats

  1. Domain
  2. Domain
1 50 100 150 200 250 300 369

Detailed signature matches

  1. Domain IPR027408
    PNPase/RNase PH domain
    1. G3DSA:3.30.23...
  2. Domain IPR020568
    Ribosomal protein S5 domain 2-type fold
    1. SSF54211 (Ribosomal...)
  3. Domain IPR001247
    Exoribonuclease, phosphorolytic domain 1
    1. PF01138 (RNase_PH)

Protein sequence

>MIA_00670_1
MASTIELSSNSNNPSISEAKPLWLSSATFARVDPELYFERHLRQGLRPGTQRGLDEFRAINSQRGSLTGVEEATAKGSFG
SCVVRSGQTSVVCGVVIGTTETRGGGGIYTNVEILRGGFNSAPSGEEMTISQRAGELVRALGLGPSNFAVRVRTPEAEME
EEQAEMEEEEGVGEIREEWEREKGIVVKRDRWLVYTAHVQVLSRTGPPFDLVWAAILGALRDVDIPEFEEDDEGNLFCVG
RRTGRKLELPAGGVVSSTFGVASVDVSKEADVFAEGLPEDEEMGREEGKPELQVVMLADPDGEIEETCAKSRMNVVSDGE
GRLYGFSFAAIGDDRLRGQDLNHQGLVLERPHIERALELAQKRASKQES

GO term prediction

Biological Process

None predicted.

Molecular Function

None predicted.

Cellular Component

None predicted.