Protein
MCA_00450_1
Length
382 amino acids
Gene name: RRP43
Description: Exosome complex component RRP43
Browser: contigA:1436406-1437555-
RNA-seq: read pairs 1199, FPKM 38.7, percentile rank 59.6% (100% = highest expression)
Protein function
| Annotation: | RRP43 | Exosome complex component RRP43 | |
|---|---|---|---|
| KEGG: | K12586 | RRP43 | exosome complex component RRP43 |
| EGGNOG: | 0PHTH | PGUG_04457 | 3' exoribonuclease family, domain 1 |
| SGD closest match: | S000000631 | RRP43 | Exosome complex component RRP43 |
| CGD closest match: | CAL0000184319 | orf19.6259 | Exosome non-catalytic core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00670_1 | 49.31% | 361 | 2e-96 | MIA_00670_1 |
| A0A167DCM4_9ASCO | 33.42% | 365 | 1e-49 | Rrp43p OS=Sugiyamaella lignohabitans GN=RRP43 PE=4 SV=1 |
| UniRef50_A0A167DCM4 | 33.42% | 365 | 3e-46 | Rrp43p n=1 Tax=Sugiyamaella lignohabitans TaxID=796027 RepID=A0A167DCM4_9ASCO |
| A0A0J9X8Z9_GEOCN | 33.24% | 373 | 2e-47 | Similar to Saccharomyces cerevisiae YCR035C RRP43 Exosome non-catalytic core component, involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm OS=Geotrichum candidum GN=BN980_GECA05s04531g PE=4 SV=1 |
| A0A1E3PDP4_9ASCO | 34.87% | 347 | 5e-46 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_53675 PE=4 SV=1 |
| A0A060T8H5_BLAAD | 30.11% | 372 | 9e-43 | ARAD1D11418p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D11418g PE=4 SV=1 |
| Q6CEK7_YARLI | 31.52% | 349 | 5e-34 | YALI0B14905p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B14905g PE=4 SV=1 |
| RRP43_YEAST | 26.43% | 367 | 5e-21 | Exosome complex component RRP43 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP43 PE=1 SV=2 |
| A0A1D8PDW1_CANAL | 26.15% | 325 | 9e-17 | Exosome non-catalytic core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.6259 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0030
Protein family membership
None predicted.
Domains and repeats
-
Domain
-
Domain
1
50
100
150
200
250
300
350
382
Detailed signature matches
Protein sequence
>MCA_00450_1 MTTIENGQQEEIPQQEEEFHPLWLSTETFARVDPELYFERHIRKGLRPNSNRRFMEFRKLLIKEGTISSQRQTDQESTIN DNPCFGSCVVRADNGGTSVVCGIVIGTTETANGGGIYPNVEILRGGFNSAPSTEEMTMSQRIFNLIEAMKFSQDNFKFRL QVNSEEDIDRMELEKEDEDPRLKLKELEEDDEGEDLTVNKHKWLVYTAHVQVLSRTGPPFDLVWAAVMGALKDVQIPLFK LDETTNQEYCVKRDTGIRIKFPTGEESIPYSSTFGITNIGTKEDAASALFLGGEDEQPQQQEEGRSVVVLADPDGEIEER CASSRVNIVCDGEGRMTGFSLGIVGDYELRGEDLNHEGLTVGRREIEQMINSAISRSKEIAN
GO term prediction
Biological Process
None predicted.
Molecular Function
None predicted.
Cellular Component
None predicted.