Protein
MIA_00598_1
Length
332 amino acids
Browser: contig01:1720111-1721110-
Protein function
| EGGNOG: | 0PFQI | FG05509.1 | exosome complex endonuclease 2 ribosomal RNA processing protein |
|---|---|---|---|
| SGD closest match: | S000002688 | RRP45 | Exosome complex component RRP45 |
| CGD closest match: | CAL0000176918 | orf19.4078 | Exosome non-catalytic core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| A0A0J9X5J7_GEOCN | 59.941% | 337 | 9.23e-131 | Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component OS=Geotrichum candidum GN=BN980_GECA03s01792g PE=4 SV=1 |
| A0A167CR44_9ASCO | 58.133% | 332 | 3.05e-124 | Exosome non-catalytic core subunit RRP45 OS=Sugiyamaella lignohabitans GN=RRP45 PE=4 SV=1 |
| UniRef50_A0A167CR44 | 58.133% | 332 | 8.37e-121 | Exosome non-catalytic core subunit RRP45 n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A167CR44_9ASCO |
| MCA_05484_1 | 55.030% | 338 | 1.86e-116 | MCA_05484_1 |
| A0A060TJJ4_BLAAD | 52.744% | 328 | 5.96e-115 | ARAD1D47256p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D47256g PE=4 SV=1 |
| A0A1E3PKB6_9ASCO | 50.613% | 326 | 2.99e-99 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51154 PE=4 SV=1 |
| Q6CFB7_YARLI | 46.626% | 326 | 1.02e-95 | YALI0B08514p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B08514g PE=4 SV=1 |
| RRP45_YEAST | 45.946% | 333 | 3.37e-92 | Exosome complex component RRP45 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP45 PE=1 SV=1 |
| A0A1E4TKS2_9ASCO | 40.308% | 325 | 2.24e-69 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_22388 PE=4 SV=1 |
| Q59X53_CANAL | 32.530% | 332 | 1.74e-40 | Exosome non-catalytic core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4078 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.1363
Protein family membership
- Exosome complex component RRP45 (IPR033100)
Domains and repeats
-
Domain
-
Domain
-
Domain
1
50
100
150
200
250
300
332
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Residue annotation
-
Rrp40 interface cd...
-
hexamer interface ...
Protein sequence
>MIA_00598_1 MPRLVDISTNDRDFFQSLLHDAGTRYDGRQFDQMRDVDISFGDSYGHVNLTLGRTKLVVRISAEVSKPYEDRPHEGIFII TTDISAMASPQFENMRQSEDEILLTRLIEKAIRRSNALDAESLVISAGSACWIIRADVHYLDFDGGLVDATCLGVIAGLL HFRRPDTSVEGNSYVVHSLEERNPIPLSILHIPISVTFSFFKPPAKNNTTTTTASSTTTIKRDSPDDDDQDMEDAAPNTI SKSDIILVDTTAKEEALRDSYMTITINKNRELCQVSKSGGTEVDGYVVMNCASTAYNIATKLTDLIQTKLKEDELSRTSP ALVSELQAENDR
GO term prediction
Biological Process
GO:0006396 RNA processing
Molecular Function
None predicted.
Cellular Component
GO:0000178 exosome (RNase complex)