Protein
MCA_05484_1
Length
332 amino acids
Gene name: RRP45
Description: Exosome complex component RRP45
Browser: contigD:1437518-1438517-
RNA-seq: read pairs 1072, FPKM 39.8, percentile rank 60.2% (100% = highest expression)
Protein function
| Annotation: | RRP45 | Exosome complex component RRP45 | |
|---|---|---|---|
| KEGG: | K03678 | RRP45 | exosome complex component RRP45 |
| EGGNOG: | 0PFQI | FG05509.1 | exosome complex endonuclease 2 ribosomal RNA processing protein |
| SGD closest match: | S000002688 | RRP45 | Exosome complex component RRP45 |
| CGD closest match: | CAL0000176918 | orf19.4078 | Exosome non-catalytic core subunit |
Protein alignments
| %id | Aln length | E-value | ||
|---|---|---|---|---|
| MIA_00598_1 | 55.13% | 341 | 2e-127 | MIA_00598_1 |
| A0A167CR44_9ASCO | 54.22% | 332 | 9e-126 | Exosome non-catalytic core subunit RRP45 OS=Sugiyamaella lignohabitans GN=RRP45 PE=4 SV=1 |
| UniRef50_A0A167CR44 | 54.22% | 332 | 3e-122 | Exosome non-catalytic core subunit RRP45 n=3 Tax=Saccharomycetales TaxID=4892 RepID=A0A167CR44_9ASCO |
| A0A0J9X5J7_GEOCN | 53.20% | 344 | 2e-123 | Similar to Saccharomyces cerevisiae YDR280W RRP45 Exosome non-catalytic core component OS=Geotrichum candidum GN=BN980_GECA03s01792g PE=4 SV=1 |
| A0A060TJJ4_BLAAD | 50.61% | 328 | 2e-115 | ARAD1D47256p OS=Blastobotrys adeninivorans GN=GNLVRS02_ARAD1D47256g PE=4 SV=1 |
| RRP45_YEAST | 47.29% | 332 | 3e-106 | Exosome complex component RRP45 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RRP45 PE=1 SV=1 |
| A0A1E3PKB6_9ASCO | 49.08% | 326 | 2e-104 | Uncharacterized protein OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_51154 PE=4 SV=1 |
| Q6CFB7_YARLI | 45.85% | 325 | 1e-100 | YALI0B08514p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_B08514g PE=4 SV=1 |
| A0A1E4TKS2_9ASCO | 41.39% | 302 | 3e-77 | Uncharacterized protein OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_22388 PE=4 SV=1 |
| Q59X53_CANAL | 32.76% | 351 | 7e-51 | Exosome non-catalytic core subunit OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=orf19.4078 PE=4 SV=1 |
Mitochondrial localization by mitoprotII
Probability of mitochondrial location: 0.0765
Protein family membership
- Exosome complex component RRP45 (IPR033100)
Domains and repeats
-
Domain
-
Domain
1
50
100
150
200
250
300
332
Detailed signature matches
no IPR
Unintegrated signatures
-
mobidb-lite (disord...)
Residue annotation
-
Rrp40 interface cd...
-
hexamer interface ...
Protein sequence
>MCA_05484_1 MPRLMDLSISEKEFIHSLLHDNATRLDGRQFDQLRPISIQFGSSLGNVQVSWGNTKLVVRISAELTKPSEDRPQEGVFVI TTDISSMASPHFENNRSTDVEETLLTRIIEKSIRRSNAIDLESLCVQAGLKCWAIRADVHYLEYDGALVDATCFGVVAGL LHFKRPDTSIIDGNQILVHPIDERPPVPLSILHIPICVTFSFYKPNSAIANSNPQTAKNKDMEDEDMDDDKDSQFESNLA TLMDATAHEELFRDGEMTVTINKNRDLCQISKTGGISVPGYTLINCSNKAFDVACKLTDLIQDALSKDQEQRSKGEGGAN VEILLQAENSRE
GO term prediction
Biological Process
GO:0006396 RNA processing
Molecular Function
None predicted.
Cellular Component
GO:0000178 exosome (RNase complex)