Protein

MIA_00580_1

Length
1,007 amino acids

Browser: contig01:1664836-1667957+

Protein function

EGGNOG:0PIZ0FG04386.1XPG I-region
SGD closest match:S000000843YEN1Holliday junction resolvase YEN1

Protein alignments

%idAln lengthE-value
MCA_05014_129.097%5981.98e-54MCA_05014_1
UniRef50_A5DRR030.451%2661.60e-17Uncharacterized protein n=1 Tax=Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239) TaxID=379508 RepID=A5DRR0_LODEL
A0A0J9X4K0_GEOCN32.547%2121.93e-15Similar to Saccharomyces cerevisiae YER041W YEN1 Holliday junction resolvase OS=Geotrichum candidum GN=BN980_GECA01s10031g PE=4 SV=1
A0A161HFM5_9ASCO34.286%1758.44e-15Yen1p OS=Sugiyamaella lignohabitans GN=YEN1 PE=4 SV=1
YEN1_YEAST22.938%3882.16e-12Holliday junction resolvase YEN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YEN1 PE=1 SV=2
Q6C4Y6_YARLI28.713%2025.12e-09YALI0E22671p OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=YALI0_E22671g PE=4 SV=1
A0A1E3PHQ3_9ASCO25.448%2791.10e-09PIN domain-like protein (Fragment) OS=Nadsonia fulvescens var. elongata DSM 6958 GN=NADFUDRAFT_12063 PE=4 SV=1
A0A1E4TFR7_9ASCO26.259%2783.27e-07Uncharacterized protein (Fragment) OS=Tortispora caseinolytica NRRL Y-17796 GN=CANCADRAFT_19392 PE=4 SV=1

Mitochondrial localization by mitoprotII

Probability of mitochondrial location: 0.0502

Protein family membership

Domains and repeats

  1. Domain
  2. Domain
1 100 200 300 400 500 600 700 800 900 1007

Detailed signature matches

  1. Family IPR006084
    XPG/Rad2 endonuclease
    1. PR00853 (XPGRADSUPER)
  2. Domain IPR029060
    PIN domain-like
    1. G3DSA:3.40.50...
    2. SSF88723 (PIN domai...)
  3. Domain IPR006086
    XPG-I domain
    1. SM00484 (xpgineu)
    2. PF00867 (XPG_I)
Unintegrated signatures no IPR
Unintegrated signatures
  1. Coil
  2. mobidb-lite (disord...)

Protein sequence

>MIA_00580_1
MGVKDIWDIIPNKYNEYIPLSVFASQFARAHNRYPVLAVDAYTWYFETKNGAPAHRTRVFFDRLCAFRRCGIHLIMVFDG
LAKRPKRRWHPAARALVHDPHREIDRYYKKMCRLLGIPVVAAPAEGEAECARFAAAGVADFVFTNDSDALVYGARNIIRY
PKNNVWVQAAPGHTPRRLEEARLSSYDRYVCVTRIPPQDSTFSQPAFIMYALLQGGDHDDGPRGIGTVHAYEISFPPTRF
ANRLMDIYHAHTLTAAQSALPSPAAAEQLKRDILIELQENRLGLFRRKISRPVAAQYVAAFPNWETVAQYLAVSTQVAAL
GQDAAKAQEIQTQIAAYHAPLPASPPIDINEICTFCLTTLEFPPVRVLNSIIPTLLPYIASHDSKLLQIKSKKSYRDAST
SSFFRSGEIITSGSSASCTRAQKSPSHSSFYDDSDIKLNLALPDYYNIVLIPSELFKALALNVDALVQSNPDFARVIHTP
WRNIVPEHVLRACKYGYIAEHEAKQTPGEQATKLKPMRNTGAAPKRILKTSRVLKNTPRAPFVEPCYGENSDTDEDIFGP
STRTCPPSSKTNFIKSKSFPQPSPTLSSKIPPRSSFIDLTEDVLDAPGFQPSLPSSSTSVSNSRLNEVISLDTDDSEEDL
FLASVAKNHPAEVHPRSREAWSAIKLDSGDQTDFWNDDTDVEIIEPVSFKAGSSNDLTSSSSKTDPLQTLYQEDPICEKA
LTKKNPDTNMDSVQINESQYTLIDYDVINSTDHNPTIPPCTVLQGNQRLHAYPANSTSCQTLANNDQSITSIIKSTNSHK
GLKRKSTQETQDVALAPASKRPALAGKHLTSVFYANGPSLATLGPFSSQPQYPDLSLVHEKGLNEQCVGNDNLNESMQNA
PTQPPSDKVSSAADLLEESLSSSDFEILEQEMARTVQVATLQKPSPVEIRSLRNGEPPSTEKLLHSPKFAPQSCSANEQL
IKFGNVFIREEEIAMSDMEASFSVLDPAHTVSKTVHEIIELLSEEEN

GO term prediction

Biological Process

GO:0006281 DNA repair

Molecular Function

GO:0004518 nuclease activity

Cellular Component

None predicted.